Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- plasma membrane 2
- mitochondrion 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G08090.1 | KRH03862 | AT5G50200.1 | 17012411 |
| AT1G08090.1 | KRH57152 | AT5G50200.1 | 17012411 |
| AT5G60780.1 | KRH03862 | AT5G50200.1 | 17012411 |
| AT5G60780.1 | KRH57152 | AT5G50200.1 | 17012411 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22855 | Soybean | peroxisome | 93.96 | 93.96 |
| KRH26509 | Soybean | peroxisome | 93.4 | 93.4 |
| VIT_06s0061g00320.t01 | Wine grape | peroxisome | 87.74 | 87.74 |
| KRH25078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 73.4 | 87.22 |
| VIT_06s0061g00310.t01 | Wine grape | plasma membrane | 40.94 | 87.15 |
| AT5G60770.1 | Thale cress | plasma membrane | 81.13 | 81.59 |
| CDY06298 | Canola | golgi, peroxisome, plasma membrane | 64.72 | 81.47 |
| Bra030713.1-P | Field mustard | golgi, peroxisome, plasma membrane | 81.13 | 81.13 |
| GSMUA_Achr8P14230_001 | Banana | golgi, peroxisome, plasma membrane | 76.6 | 80.88 |
| CDY32821 | Canola | cytosol, peroxisome, plasma membrane | 70.75 | 80.82 |
| CDX93591 | Canola | golgi, peroxisome, plasma membrane | 70.57 | 80.6 |
| Bra002453.1-P | Field mustard | golgi, peroxisome, plasma membrane, plastid | 80.0 | 80.46 |
| CDY22704 | Canola | cytosol, peroxisome, plasma membrane | 70.19 | 80.35 |
| Bra031610.1-P | Field mustard | golgi, peroxisome, plasma membrane | 80.19 | 80.34 |
| Bra018655.1-P | Field mustard | golgi, peroxisome, plasma membrane | 75.85 | 80.24 |
| GSMUA_Achr11P... | Banana | cytosol | 72.83 | 80.08 |
| CDX93592 | Canola | golgi, peroxisome, plasma membrane | 69.43 | 80.0 |
| Bra018656.1-P | Field mustard | golgi, peroxisome, plasma membrane | 73.4 | 79.88 |
| AT1G08090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 79.25 | 79.25 |
| CDY72274 | Canola | plasma membrane | 52.26 | 78.47 |
| CDY68730 | Canola | endoplasmic reticulum, plasma membrane | 58.11 | 78.37 |
| CDY70994 | Canola | golgi, plasma membrane | 51.89 | 77.9 |
| CDY22703 | Canola | golgi, peroxisome, plasma membrane | 73.4 | 77.49 |
| CDY06299 | Canola | golgi, peroxisome, plasma membrane | 73.77 | 77.27 |
| Bra031611.1-P | Field mustard | golgi, peroxisome, plasma membrane | 73.58 | 77.08 |
| TraesCS6A01G030900.1 | Wheat | plasma membrane | 73.58 | 76.92 |
| TraesCS6A01G030700.1 | Wheat | plastid | 73.21 | 76.53 |
| TraesCS6A01G031000.1 | Wheat | plasma membrane | 73.21 | 76.53 |
| TraesCS6B01G044200.1 | Wheat | plasma membrane | 73.21 | 76.53 |
| TraesCS6D01G035900.1 | Wheat | plasma membrane | 73.21 | 76.53 |
| Zm00001d054060_P001 | Maize | plastid | 75.66 | 76.53 |
| Zm00001d054057_P001 | Maize | extracellular | 75.47 | 76.34 |
| TraesCS6B01G044300.1 | Wheat | plasma membrane | 73.02 | 76.33 |
| TraesCS6A01G031100.1 | Wheat | plastid | 72.83 | 76.13 |
| TraesCS6B01G044100.1 | Wheat | plastid | 72.83 | 76.13 |
| TraesCS6D01G035700.1 | Wheat | plasma membrane | 72.83 | 76.13 |
| TraesCS6D01G035800.1 | Wheat | plasma membrane | 72.83 | 76.13 |
| HORVU6Hr1G005590.1 | Barley | plasma membrane | 72.64 | 75.94 |
| TraesCS6A01G030800.1 | Wheat | plasma membrane | 72.64 | 75.94 |
| TraesCS6D01G035600.1 | Wheat | plasma membrane | 72.83 | 75.83 |
| EES04351 | Sorghum | golgi, peroxisome, plasma membrane | 75.28 | 75.71 |
| EES06135 | Sorghum | golgi, peroxisome, plasma membrane | 75.28 | 75.71 |
| TraesCS6A01G031200.1 | Wheat | plasma membrane | 72.64 | 75.64 |
| Os02t0112100-01 | Rice | golgi, plasma membrane, plastid | 76.04 | 75.61 |
| Os02t0112600-01 | Rice | golgi, plasma membrane, plastid | 76.04 | 75.61 |
| TraesCS6B01G044000.1 | Wheat | plasma membrane | 72.45 | 75.44 |
| AT1G08100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 73.96 | 75.1 |
| HORVU6Hr1G005750.1 | Barley | cytosol, plastid | 14.15 | 74.26 |
| AT5G60780.1 | Thale cress | peroxisome | 74.72 | 73.47 |
| HORVU6Hr1G005600.2 | Barley | endoplasmic reticulum | 70.38 | 73.28 |
| Bra002451.1-P | Field mustard | golgi, peroxisome, plasma membrane | 73.77 | 72.95 |
| Solyc06g010250.2.1 | Tomato | plasma membrane | 68.49 | 72.89 |
| CDY69111 | Canola | peroxisome | 65.85 | 72.71 |
| AT3G45060.1 | Thale cress | peroxisome | 74.34 | 72.69 |
| CDY50324 | Canola | plasma membrane | 65.66 | 72.5 |
| Bra038302.1-P | Field mustard | peroxisome | 73.4 | 72.3 |
| Bra020230.1-P | Field mustard | peroxisome | 66.42 | 72.13 |
| Bra037625.1-P | Field mustard | peroxisome | 73.58 | 72.09 |
| Bra034142.1-P | Field mustard | plasma membrane | 20.94 | 72.08 |
| HORVU6Hr1G005570.1 | Barley | golgi, plasma membrane | 36.98 | 72.06 |
| PGSC0003DMT400050654 | Potato | plasma membrane | 71.32 | 72.0 |
| Bra037626.1-P | Field mustard | peroxisome | 74.15 | 71.98 |
| Solyc11g069750.1.1 | Tomato | extracellular | 70.94 | 71.62 |
| Bra038301.1-P | Field mustard | golgi, peroxisome, plasma membrane | 72.83 | 71.09 |
| TraesCS6D01G038100.1 | Wheat | golgi, plasma membrane, vacuole | 68.11 | 70.92 |
| HORVU6Hr1G005580.1 | Barley | plastid | 72.83 | 70.83 |
| PGSC0003DMT400040689 | Potato | plasma membrane | 70.0 | 70.8 |
| HORVU6Hr1G005780.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 61.51 | 70.72 |
| TraesCS6D01G037200.1 | Wheat | golgi, plasma membrane, plastid | 67.74 | 70.67 |
| TraesCS6D01G037300.1 | Wheat | golgi, plasma membrane, plastid | 67.74 | 70.67 |
| TraesCS6A01G032400.1 | Wheat | plastid | 67.55 | 70.47 |
| TraesCS6B01G045600.1 | Wheat | golgi, plasma membrane, vacuole | 67.55 | 70.47 |
| TraesCS6A01G033000.1 | Wheat | plasma membrane | 67.55 | 70.33 |
| TraesCS6B01G046600.1 | Wheat | plasma membrane | 67.55 | 70.33 |
| TraesCS6A01G032500.1 | Wheat | plastid | 67.36 | 70.28 |
| CDY26984 | Canola | plasma membrane | 60.38 | 70.18 |
| TraesCS6D01G037900.1 | Wheat | plasma membrane | 67.36 | 70.14 |
| TraesCS6B01G045700.1 | Wheat | plastid | 66.79 | 69.96 |
| TraesCS2A01G074800.1 | Wheat | plasma membrane | 66.23 | 69.92 |
| TraesCS6B01G046500.1 | Wheat | plasma membrane | 66.79 | 69.82 |
| TraesCS6D01G037800.1 | Wheat | plasma membrane | 66.79 | 69.82 |
| TraesCS6A01G032900.1 | Wheat | golgi, plasma membrane, vacuole | 66.98 | 69.74 |
| HORVU6Hr1G005770.1 | Barley | plasma membrane | 66.79 | 69.55 |
| CDY31024 | Canola | endoplasmic reticulum, plasma membrane | 20.19 | 69.48 |
| TraesCS6A01G032800.1 | Wheat | plasma membrane | 66.42 | 69.43 |
| TraesCS2D01G073500.1 | Wheat | plasma membrane | 65.09 | 69.14 |
| HORVU6Hr1G005720.1 | Barley | extracellular | 49.43 | 69.13 |
| EES04350 | Sorghum | plastid | 69.62 | 68.97 |
| TraesCS6B01G044500.1 | Wheat | plastid | 63.02 | 68.87 |
| TraesCS6B01G044400.1 | Wheat | plastid | 73.4 | 68.85 |
| TraesCS6D01G038000.1 | Wheat | plasma membrane | 65.85 | 68.84 |
| HORVU6Hr1G005930.1 | Barley | plasma membrane | 65.85 | 68.7 |
| TraesCS6B01G046700.1 | Wheat | plasma membrane | 65.85 | 68.7 |
| TraesCS6D01G038200.1 | Wheat | plasma membrane | 65.85 | 68.7 |
| TraesCS6A01G033100.1 | Wheat | plasma membrane | 65.66 | 68.5 |
| TraesCS6A01G033200.1 | Wheat | plasma membrane | 65.66 | 68.5 |
| TraesCS6D01G038300.1 | Wheat | plasma membrane | 65.47 | 68.31 |
| Zm00001d014976_P001 | Maize | plasma membrane | 67.17 | 68.2 |
| CDY53125 | Canola | plastid | 22.08 | 63.59 |
| KRG99396 | Soybean | plasma membrane | 60.19 | 62.55 |
| KRH45628 | Soybean | plasma membrane | 59.43 | 62.01 |
| CDY31023 | Canola | endoplasmic reticulum, extracellular | 9.06 | 57.14 |
| CDX99169 | Canola | cytosol | 7.92 | 56.0 |
| AT4G14358.1 | Thale cress | cytosol | 7.74 | 47.13 |
Protein Annotations
| Gene3D:1.20.1250.20 | EntrezGene:100807710 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | UniProt:A0A0R0HJF2 | EMBL:ACUP02007039 |
| EnsemblPlantsGene:GLYMA_11G195200 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:IPR020846 | EnsemblPlants:KRH30604 | ProteinID:KRH30604 | ProteinID:KRH30604.1 | InterPro:MFS |
| InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF07690 | PFscan:PS50850 | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 |
| SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0001890CD6 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr11:-:26869341..26872412
Molecular Weight (calculated)
57493.1 Da
IEP (calculated)
9.295
GRAVY (calculated)
0.338
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: MADIEGSPGS SMHGVTGREQ TFIASVASPM VPTDTTANFA LPVDSEHKAK IFKLFSLANP HMRTFHLSWI SFFTCFVSTF AAAPLVPIIR DNLNLTKGDI
101: GNAGVASVSG SIFSRLTMGA VCDLLGPRYG CAFLIMLSAP TVFCMSFVND AAGYIAVRFM IGFSLATFVS CQYWMSTMFN SKIIGLVNGT AAGWGNMGGG
201: ATQLIMPMVY ELIRRAGATP FTAWRIAFFV PGWMHVVMGI LVLTLGQDLP DGNLGALQKK GNVAKDKFSK VLWYAITNYR TWVFALLYGY SMGVELTTDN
301: VIAEYFYDRF NLKLHTAGII AASFGMANLL ARPFGGYTSD VAARLFGMRG RLWNLWILQT LGGVFCIWLG RANSLPIAVL AMILFSIGAQ AACGATFGII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLIF FSTSRFSTST GLSLMGVMIV CCTLPVTLVH FPQWGSMFLP PSKDVNKSTE EYYYTAEWNE EEKQKGLHQN
501: SLKFAENSRS ERGKRVASAP TPPNTTPTHA
101: GNAGVASVSG SIFSRLTMGA VCDLLGPRYG CAFLIMLSAP TVFCMSFVND AAGYIAVRFM IGFSLATFVS CQYWMSTMFN SKIIGLVNGT AAGWGNMGGG
201: ATQLIMPMVY ELIRRAGATP FTAWRIAFFV PGWMHVVMGI LVLTLGQDLP DGNLGALQKK GNVAKDKFSK VLWYAITNYR TWVFALLYGY SMGVELTTDN
301: VIAEYFYDRF NLKLHTAGII AASFGMANLL ARPFGGYTSD VAARLFGMRG RLWNLWILQT LGGVFCIWLG RANSLPIAVL AMILFSIGAQ AACGATFGII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLIF FSTSRFSTST GLSLMGVMIV CCTLPVTLVH FPQWGSMFLP PSKDVNKSTE EYYYTAEWNE EEKQKGLHQN
501: SLKFAENSRS ERGKRVASAP TPPNTTPTHA
001: MADGFGEPGS SMHGVTGREQ SYAFSVESPA VPSDSSAKFS LPVDTEHKAK VFKLLSFEAP HMRTFHLAWI SFFTCFISTF AAAPLVPIIR DNLNLTRQDV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVGG AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPMVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD IAARRFGMRG RLWTLWIIQT LGGFFCLWLG RATTLPTAVV FMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFSTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLP STEDEVKSTE EYYYMKEWTE TEKRKGMHEG
501: SLKFAVNSRS ERGRRVASAP SPPPEHV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVGG AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPMVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD IAARRFGMRG RLWTLWIIQT LGGFFCLWLG RATTLPTAVV FMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFSTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLP STEDEVKSTE EYYYMKEWTE TEKRKGMHEG
501: SLKFAVNSRS ERGRRVASAP SPPPEHV
Arabidopsis Description
NRT2.4High affinity nitrate transporter 2.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.