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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • plasma membrane 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038301.1-P Field mustard golgi, peroxisome, plasma membrane 89.56 90.06
Bra034142.1-P Field mustard plasma membrane 25.09 88.96
Bra037625.1-P Field mustard peroxisome 82.23 82.99
Bra038302.1-P Field mustard peroxisome 80.95 82.16
Bra020230.1-P Field mustard peroxisome 72.71 81.35
Bra002451.1-P Field mustard golgi, peroxisome, plasma membrane 79.12 80.6
VIT_06s0061g00320.t01 Wine grape peroxisome 72.71 74.91
KRH26509 Soybean peroxisome 72.71 74.91
KRH22855 Soybean peroxisome 72.53 74.72
KRH30604 Soybean peroxisome 71.98 74.15
Bra002453.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 70.88 73.43
HORVU6Hr1G005750.1 Barley cytosol, plastid 13.55 73.27
VIT_06s0061g00310.t01 Wine grape plasma membrane 32.78 71.89
Bra030713.1-P Field mustard golgi, peroxisome, plasma membrane 69.41 71.51
Bra031610.1-P Field mustard golgi, peroxisome, plasma membrane 68.86 71.08
Bra018656.1-P Field mustard golgi, peroxisome, plasma membrane 63.37 71.05
PGSC0003DMT400050654 Potato plasma membrane 67.95 70.67
Bra018655.1-P Field mustard golgi, peroxisome, plasma membrane 64.65 70.46
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 64.65 70.32
Solyc06g010250.2.1 Tomato plasma membrane 64.1 70.28
Solyc11g069750.1.1 Tomato extracellular 67.4 70.1
Bra031611.1-P Field mustard golgi, peroxisome, plasma membrane 64.84 69.96
GSMUA_Achr11P... Banana cytosol 61.36 69.5
PGSC0003DMT400040689 Potato plasma membrane 66.3 69.08
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 56.04 68.61
HORVU6Hr1G005590.1 Barley plasma membrane 62.64 67.46
EES06135 Sorghum golgi, peroxisome, plasma membrane 65.02 67.36
EES04351 Sorghum golgi, peroxisome, plasma membrane 65.02 67.36
TraesCS6B01G044300.1 Wheat plasma membrane 62.45 67.26
TraesCS6D01G035700.1 Wheat plasma membrane 62.45 67.26
TraesCS6A01G031100.1 Wheat plastid 62.45 67.26
TraesCS6D01G035900.1 Wheat plasma membrane 62.45 67.26
TraesCS6D01G035600.1 Wheat plasma membrane 62.64 67.19
TraesCS6A01G030900.1 Wheat plasma membrane 62.27 67.06
TraesCS6D01G035800.1 Wheat plasma membrane 62.27 67.06
TraesCS6A01G031000.1 Wheat plasma membrane 62.27 67.06
TraesCS6B01G044200.1 Wheat plasma membrane 62.27 67.06
TraesCS6A01G030700.1 Wheat plastid 62.27 67.06
TraesCS6A01G030800.1 Wheat plasma membrane 62.09 66.86
TraesCS6B01G044100.1 Wheat plastid 62.09 66.86
TraesCS6A01G031200.1 Wheat plasma membrane 62.27 66.8
TraesCS6B01G044000.1 Wheat plasma membrane 62.27 66.8
Zm00001d054060_P001 Maize plastid 64.1 66.79
Zm00001d054057_P001 Maize extracellular 64.1 66.79
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 61.36 65.94
TraesCS6A01G032400.1 Wheat plastid 61.17 65.75
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 55.49 65.73
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 60.99 65.55
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 60.99 65.55
Os02t0112100-01 Rice golgi, plasma membrane, plastid 63.92 65.48
Os02t0112600-01 Rice golgi, plasma membrane, plastid 63.92 65.48
TraesCS6B01G046600.1 Wheat plasma membrane 60.99 65.42
TraesCS6D01G037800.1 Wheat plasma membrane 60.62 65.29
TraesCS6A01G032500.1 Wheat plastid 60.44 64.96
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 60.44 64.83
HORVU6Hr1G005930.1 Barley plasma membrane 60.26 64.76
TraesCS6D01G037900.1 Wheat plasma membrane 60.26 64.64
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 60.26 64.64
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 60.26 64.64
TraesCS6D01G038200.1 Wheat plasma membrane 60.07 64.57
TraesCS6B01G046500.1 Wheat plasma membrane 59.89 64.5
TraesCS6B01G045700.1 Wheat plastid 59.71 64.43
TraesCS6A01G033000.1 Wheat plasma membrane 59.89 64.24
TraesCS6D01G038300.1 Wheat plasma membrane 59.71 64.17
TraesCS6A01G033100.1 Wheat plasma membrane 59.71 64.17
TraesCS6A01G032800.1 Wheat plasma membrane 59.52 64.1
HORVU6Hr1G005770.1 Barley plasma membrane 59.71 64.05
TraesCS6B01G046700.1 Wheat plasma membrane 59.52 63.98
TraesCS6A01G033200.1 Wheat plasma membrane 59.52 63.98
TraesCS6D01G038000.1 Wheat plasma membrane 59.34 63.91
HORVU6Hr1G005720.1 Barley extracellular 44.14 63.59
HORVU6Hr1G005580.1 Barley plastid 62.82 62.94
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 31.32 62.87
EES04350 Sorghum plastid 60.81 62.06
TraesCS2A01G074800.1 Wheat plasma membrane 56.59 61.55
TraesCS2D01G073500.1 Wheat plasma membrane 56.23 61.52
Zm00001d014976_P001 Maize plasma membrane 58.61 61.3
TraesCS6B01G044400.1 Wheat plastid 63.0 60.88
TraesCS6B01G044500.1 Wheat plastid 53.66 60.41
Bra023475.1-P Field mustard plastid 38.46 43.39
Bra016747.1-P Field mustard plasma membrane 43.77 41.57
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.10MapMan:25.1.3.1EnsemblPlantsGene:Bra037626EnsemblPlants:Bra037626.1EnsemblPlants:Bra037626.1-P
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0055085
InterPro:IPR020846UniProt:M4F963InterPro:MFSInterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF07690
PANTHER:PTHR23515PANTHER:PTHR23515:SF3SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000254399ESEG:seg
Description
AT3G45060 (E=2e-256) ATNRT2.6, NRT2.6 | ATNRT2.6; nitrate transmembrane transporter
Coordinates
chrA01:-:13433817..13436388
Molecular Weight (calculated)
59277.7 Da
IEP (calculated)
7.395
GRAVY (calculated)
0.302
Length
546 amino acids
Sequence
(BLAST)
001: MAHHNEDEGS IGTSMHGVTA REQVFSFSVQ GEDDGPSSHT VGFDDPTAKF ALPVDSEHRA TAFKPFSFAK PHMRAFHLGW ISFFTCFIST FAAAPLVPII
101: RDNLDLTKSD IGNAGVASVS GAIFSRLAMG AVCDLLGARY GTAFLLMLSA PTVFSMSFVS DAGGYLSVRF MIGFCLATFV SCQYWTSVMF NGKIIGLVNG
201: CAGGWGDMGG GVTQLLMPMV FHVIKLAGAT PFTAWRIAFF IPGFLQVIMG ILVLTLGQDL PDGNLSTLQK RGEVSKDKFT KVFWYAVLNY RTYVLFLLYG
301: FSMGIEMTIN NVISEYFFDR FQLELHTAGM IAASFGMANF FARPLGGYAS DISARFFGMR GRLWTLWILQ TSGGIFCVWL GRATSLPIAI LSMMLFSVGV
401: QAACGAIFGI VPFVSRRSLG LISGLTGAGG NFGSGLTQLI FFSSSKFHAA DGLSLMGIMG MIFTLLVAFI HFPQWGSMFF GPTSDEKKSK EEHYYAAEWT
501: EEEKRQGLHE GSLKFAENSR SERGRKAASD GSSPSTPPEN GNPAHV
Best Arabidopsis Sequence Match ( AT3G45060.1 )
(BLAST)
001: MAHNHSNEDG SIGTSLHGVT AREQVFSFSV QEDVPSSQAV RTNDPTAKFA LPVDSEHRAK VFKPLSFAKP HMRAFHLGWI SFFTCFISTF AAAPLVPVIR
101: DNLDLTKTDI GNAGVASVSG AIFSRLAMGA VCDLLGARYG TAFSLMLTAP AVFSMSFVAD AGSYLAVRFM IGFCLATFVS CQYWTSVMFT GKIIGLVNGC
201: AGGWGDMGGG VTQLLMPMVF HVIKLTGATP FTAWRFAFFI PGILQIVMGI LVLTLGQDLP DGNLSTLQKS GQVSKDKFSK VFWFAVKNYR TWILFMLYGF
301: SMGVELTINN VISGYFYDRF NLTLHTAGII AASFGMANFF ARPFGGYASD VAARLFGMRG RLWILWILQT VGALFCIWLG RASSLPIAIL AMMLFSMGTQ
401: AACGALFGVA PFVSRRSLGL ISGLTGAGGN FGSGVTQLLF FSSSRFSTAE GLSLMGVMAV VCSLPVAFIH FPQWGSMFLR PSQDGEKSKE EHYYGAEWTE
501: EEKSLGLHEG SIKFAENSRS ERGRKAMLAD IPTPETGSPA HV
Arabidopsis Description
NRT2.6High affinity nitrate transporter 2.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXH0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.