Factsheet for Bra020230.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
nucleus 1
peroxisome 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000613.1-P
Bra022511.1-P
Bra033790.1-P
Bra037934.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G60780.1	Bra000613.1-P	AT5G50200.1	17012411
AT5G60780.1	Bra022511.1-P	AT5G50200.1	17012411
AT5G60780.1	Bra033790.1-P	AT5G50200.1	17012411
AT5G60780.1	Bra037934.1-P	AT5G50200.1	17012411

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002451.1-P	Field mustard	golgi, peroxisome, plasma membrane	92.21	83.96
AT5G60780.1	Thale cress	peroxisome	91.6	82.93
Bra037625.1-P	Field mustard	peroxisome	88.93	80.22
Bra038302.1-P	Field mustard	peroxisome	86.68	78.62
VIT_06s0061g00310.t01	Wine grape	plasma membrane	37.5	73.49
Bra037626.1-P	Field mustard	peroxisome	81.35	72.71
Bra038301.1-P	Field mustard	golgi, peroxisome, plasma membrane	79.71	71.64
HORVU6Hr1G005750.1	Barley	cytosol, plastid	13.93	67.33
VIT_06s0061g00320.t01	Wine grape	peroxisome	72.95	67.17
KRH26509	Soybean	peroxisome	72.54	66.79
KRH22855	Soybean	peroxisome	72.54	66.79
KRH30604	Soybean	peroxisome	72.13	66.42
HORVU6Hr1G005570.1	Barley	golgi, plasma membrane	36.48	65.44
Solyc06g010250.2.1	Tomato	plasma membrane	66.6	65.26
Bra034142.1-P	Field mustard	plasma membrane	20.49	64.94
PGSC0003DMT400040689	Potato	plasma membrane	69.67	64.89
GSMUA_Achr8P14230_001	Banana	golgi, peroxisome, plasma membrane	66.19	64.34
PGSC0003DMT400050654	Potato	plasma membrane	68.65	63.81
GSMUA_Achr11P...	Banana	cytosol	62.91	63.69
Solyc11g069750.1.1	Tomato	extracellular	68.24	63.43
Bra002453.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	67.83	62.81
Bra030713.1-P	Field mustard	golgi, peroxisome, plasma membrane	67.42	62.08
Bra018655.1-P	Field mustard	golgi, peroxisome, plasma membrane	63.11	61.48
Bra031610.1-P	Field mustard	golgi, peroxisome, plasma membrane	66.6	61.44
Bra018656.1-P	Field mustard	golgi, peroxisome, plasma membrane	60.45	60.57
Bra031611.1-P	Field mustard	golgi, peroxisome, plasma membrane	62.7	60.47
TraesCS6D01G035700.1	Wheat	plasma membrane	62.7	60.35
TraesCS6B01G044200.1	Wheat	plasma membrane	62.5	60.16
HORVU6Hr1G005590.1	Barley	plasma membrane	62.5	60.16
TraesCS6B01G044300.1	Wheat	plasma membrane	62.5	60.16
TraesCS6D01G035900.1	Wheat	plasma membrane	62.5	60.16
TraesCS6D01G035800.1	Wheat	plasma membrane	62.3	59.96
TraesCS6A01G030700.1	Wheat	plastid	62.3	59.96
TraesCS6A01G030900.1	Wheat	plasma membrane	62.3	59.96
TraesCS6A01G031000.1	Wheat	plasma membrane	62.3	59.96
TraesCS6A01G031100.1	Wheat	plastid	62.3	59.96
TraesCS6A01G030800.1	Wheat	plasma membrane	62.09	59.76
TraesCS6B01G044100.1	Wheat	plastid	62.09	59.76
Os02t0112100-01	Rice	golgi, plasma membrane, plastid	65.16	59.66
Os02t0112600-01	Rice	golgi, plasma membrane, plastid	65.16	59.66
EES04351	Sorghum	golgi, peroxisome, plasma membrane	64.34	59.58
EES06135	Sorghum	golgi, peroxisome, plasma membrane	64.34	59.58
Zm00001d054060_P001	Maize	plastid	63.73	59.35
Zm00001d054057_P001	Maize	extracellular	63.73	59.35
KRH25078	Soybean	peroxisome, plasma membrane, plastid, vacuole	53.89	58.97
HORVU6Hr1G005720.1	Barley	extracellular	45.7	58.84
TraesCS6D01G035600.1	Wheat	plasma membrane	61.27	58.74
TraesCS6B01G044000.1	Wheat	plasma membrane	61.27	58.74
TraesCS6A01G031200.1	Wheat	plasma membrane	61.07	58.55
HORVU6Hr1G005780.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	54.92	58.13
TraesCS6D01G037200.1	Wheat	golgi, plasma membrane, plastid	60.45	58.07
TraesCS6A01G032500.1	Wheat	plastid	60.45	58.07
TraesCS6B01G045600.1	Wheat	golgi, plasma membrane, vacuole	60.45	58.07
TraesCS6A01G032400.1	Wheat	plastid	60.45	58.07
TraesCS6D01G037800.1	Wheat	plasma membrane	60.25	57.99
TraesCS6D01G037300.1	Wheat	golgi, plasma membrane, plastid	60.25	57.87
TraesCS6D01G037900.1	Wheat	plasma membrane	60.25	57.76
TraesCS6B01G046600.1	Wheat	plasma membrane	60.25	57.76
TraesCS6B01G045700.1	Wheat	plastid	59.84	57.71
TraesCS6B01G046500.1	Wheat	plasma membrane	59.63	57.4
TraesCS6A01G033200.1	Wheat	plasma membrane	59.63	57.28
TraesCS6A01G032800.1	Wheat	plasma membrane	59.43	57.2
TraesCS6D01G038100.1	Wheat	golgi, plasma membrane, vacuole	59.63	57.17
TraesCS6A01G033000.1	Wheat	plasma membrane	59.63	57.17
TraesCS6B01G046700.1	Wheat	plasma membrane	59.43	57.09
HORVU6Hr1G005770.1	Barley	plasma membrane	59.43	56.97
TraesCS6A01G032900.1	Wheat	golgi, plasma membrane, vacuole	59.43	56.97
HORVU6Hr1G005930.1	Barley	plasma membrane	59.22	56.89
TraesCS6D01G038200.1	Wheat	plasma membrane	59.22	56.89
TraesCS6A01G033100.1	Wheat	plasma membrane	59.02	56.69
TraesCS6D01G038300.1	Wheat	plasma membrane	59.02	56.69
EES04350	Sorghum	plastid	61.89	56.45
HORVU6Hr1G005600.2	Barley	endoplasmic reticulum	58.81	56.39
HORVU6Hr1G005580.1	Barley	plastid	62.91	56.33
Zm00001d014976_P001	Maize	plasma membrane	60.25	56.32
TraesCS6D01G038000.1	Wheat	plasma membrane	58.4	56.21
TraesCS6B01G044500.1	Wheat	plastid	54.92	55.26
TraesCS2A01G074800.1	Wheat	plasma membrane	56.15	54.58
TraesCS2D01G073500.1	Wheat	plasma membrane	55.74	54.51
TraesCS6B01G044400.1	Wheat	plastid	62.91	54.34
Bra023475.1-P	Field mustard	plastid	38.73	39.05
Bra016747.1-P	Field mustard	plasma membrane	44.06	37.39

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	EnsemblPlantsGene:Bra020230	EnsemblPlants:Bra020230.1	EnsemblPlants:Bra020230.1-P
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR020846	UniProt:M4DUN7	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF07690
PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002543516	SEG:seg

Description

AT5G60780 (E=1e-163) ATNRT2.3, NRT2.3 | ATNRT2.3; nitrate transmembrane transporter

Coordinates

chrA02:-:5693857..5695967

Molecular Weight (calculated)

52842.1 Da

IEP (calculated)

9.237

GRAVY (calculated)

0.311

Length

488 amino acids

Sequence
(BLAST)

001: MASNEEGSIG TSLHGVTARE QVFSFSVDSS SQTLQSDDPT AKFALPVDSE HRAKVFKPLS FAKPHMRAFH LRWICFFSCF ISTFSAAPLG PIIRDNLDLT
101: KTDVGNAGVA SVSGAIFSRL AMGAVCDLLG ARVMFNGKII GLVNGCAGGG GDMGGGVTQL LMPMVFQVIR LAGTTPFMAW RIAFFIPGFL QVVVGVLVLT
201: LGQDLPDGNL STLQKSGQVS KDKFSKVFWF AVKNYRTWIL FVLYGFSMGI ELTINNVISG YFFDRFNLKL QTAGIVAASF GMANFFARPF GGYASDLAAR
301: LFGMRGRLWI LWIFQTVGAL FCIWLGRASS LPIAILAMML FSVGTQAACG ALFGVAPFVS RRSLGLISGL TGAGGNFGSG LTQLLFFSTS RFSTADGLSL
401: MGAMAVLCTV PVAFIHFPQW GSMFLRPSSD GERSKEEYYY SSEWTEEEKR QGLHEGSIKF AENSRSERSR KVALADFPTP ETGTPTHV

Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)

001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV

Arabidopsis Description

NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.