CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99396	Soybean	plasma membrane	96.65	96.27
VIT_01s0127g00070.t01	Wine grape	plasma membrane	79.33	79.8
CDY34599	Canola	plasma membrane	72.44	73.9
PGSC0003DMT400043794	Potato	plasma membrane	72.64	73.8
CDY21075	Canola	plasma membrane	72.24	73.55
AT1G12940.1	Thale cress	plasma membrane	72.24	73.11
GSMUA_Achr4P06400_001	Banana	plasma membrane	62.8	69.35
GSMUA_Achr4P13270_001	Banana	plasma membrane	62.01	68.63
EES01339	Sorghum	plasma membrane	67.52	66.6
Zm00001d011679_P001	Maize	plasma membrane	67.52	65.96
TraesCS3A01G254000.1	Wheat	plasma membrane	65.35	64.59
TraesCS3B01G285900.1	Wheat	plasma membrane	65.35	64.59
TraesCS3D01G254900.1	Wheat	plasma membrane	65.35	64.59
HORVU3Hr1G066090.1	Barley	plasma membrane	64.96	64.2
Os01t0704100-02	Rice	plasma membrane	64.57	63.57
TraesCSU01G002800.1	Wheat	plasma membrane	64.37	63.5
TraesCS1D01G035700.1	Wheat	plasma membrane	64.17	62.93
KRH22855	Soybean	peroxisome	62.01	59.43
KRH30604	Soybean	peroxisome	62.01	59.43
KRH26509	Soybean	peroxisome	61.81	59.25
KRH25078	Soybean	peroxisome, plasma membrane, plastid, vacuole	48.82	55.61
Bra016747.1-P	Field mustard	plasma membrane	60.63	53.57

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100803196	MapMan:24.2.2.10	MapMan:25.1.3.1	EMBL:ACUP02005273	EnsemblPlantsGene:GLYMA_08G284000
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987
GO:GO:0015112	GO:GO:0015706	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0071249
UniProt:I1KXC5	InterPro:IPR020846	EnsemblPlants:KRH45628	ProteinID:KRH45628	ProteinID:KRH45628.1	InterPro:MFS
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF07690	PFscan:PS50850	PANTHER:PTHR23515	PANTHER:PTHR23515:SF3
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002338590	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:+:39137710..39140974

Molecular Weight (calculated)

55262.4 Da

IEP (calculated)

9.330

GRAVY (calculated)

0.410

Length

508 amino acids

Sequence
(BLAST)

001: MDIELPAATA NESQQQKFAL PVDSENKATV FRLFSLANPH MRAFHLSWVS FFACFVSSFA APPLLPIIRD NLNLTATDIG NAGVASVSGA VLARIAMGTA
101: CDLVGPRLAS ASLILLTAPF VYFTSIINSS TSYLLVRFFT GFSLATFVST QFWMSSMFSA PVVGSANGFS GGWGNLGGGA TQLIMPLVFS LIRDIGASKF
201: TAWRIAFFVP AMFQMLTAFS ILLFGQDMPD GNFHRLKKSG EKAKDDFSRV LFHGVTNYRG WILGLTYGYC FGVELTIDNI IAEYFYDRFN LKLHTAGIIA
301: ASFGLANFFS RPGGGYISDV MAKRFGMRGR LWALWICQTL AGVFCIILGL VGSLSVSIVV MIIFSVFVQA ACGMTFGIVP FVSRRSLGVI SGMTGGGGNV
401: GAVVTQLIFF KGSRFSKERG ITLMGAMIII CSLPICLIYF PQWGGMFSGP SSKKVTEEDY YLAEWNSKEK EKGSHHASLK FADNSRSERG RKLNASTELT
501: EEITPPHV

Best Arabidopsis Sequence Match ( AT1G12940.1 )
(BLAST)

001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT

Arabidopsis Description

NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.