Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G035700.1 | Wheat | plasma membrane | 97.48 | 96.91 |
| EES01339 | Sorghum | plasma membrane | 83.69 | 83.69 |
| Zm00001d011679_P001 | Maize | plasma membrane | 82.52 | 81.73 |
| Os01t0704100-02 | Rice | plasma membrane | 80.97 | 80.81 |
| GSMUA_Achr4P13270_001 | Banana | plasma membrane | 66.41 | 74.51 |
| GSMUA_Achr4P06400_001 | Banana | plasma membrane | 64.85 | 72.61 |
| PGSC0003DMT400043794 | Potato | plasma membrane | 66.02 | 68.0 |
| VIT_01s0127g00070.t01 | Wine grape | plasma membrane | 66.6 | 67.92 |
| KRG99396 | Soybean | plasma membrane | 65.63 | 66.27 |
| KRH45628 | Soybean | plasma membrane | 63.5 | 64.37 |
| CDY34599 | Canola | plasma membrane | 62.14 | 64.26 |
| CDY21075 | Canola | plasma membrane | 62.14 | 64.13 |
| AT1G12940.1 | Thale cress | plasma membrane | 61.55 | 63.15 |
| Bra016747.1-P | Field mustard | plasma membrane | 54.37 | 48.7 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015706 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF07690 | PANTHER:PTHR23515 |
| PANTHER:PTHR23515:SF3 | SUPFAM:SSF103473 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCSU01G002800 | EnsemblPlants:TraesCSU01G002800.1 | TIGR:cd06174 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:2667931..2669478
Molecular Weight (calculated)
55341.3 Da
IEP (calculated)
9.262
GRAVY (calculated)
0.364
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGAAAMEME VQAAPKAKFR IPVDDDSKAT EFWLFSFARP HMSAFHLSWF SFFCCFVSTF AAPPLMPLIR DNLGLTAKDI GNAGVASVSG AVFARLAMGT
101: ACDLVGPRLA SAAIILLTTP AVYCTSIINS ASSFLLARFF TGFSLASFVS TQFWMSSMFS APKVGLANGV AGGWGNLGGG AVQLLMPFVF EAVRKMGSTK
201: FVAWRVAFFI PGIMQTVSAI AVLALGQDMP DGNYRKLHKS GEMHKDSFGN VLRHAVTNYR AWILALTYGY SFGVELAVDN IVAEYFYDRF DVNLKTAGLI
301: AATFGLANIV SRPGGGLMSD WLSQRYGMRG RLWGLWVMQT IGGVLCVVLG IVDYSFGASV AVMILFSLFC QAACGLTFGI VPFVSRRSLG LISGMTGGGG
401: NVGAVLTQVI FFRGGKYKTE TGIMYMGIMI LACTLPVAFI YFPQWGGMLA GPRKGATADD YYNGEWTAEE REKGYNAATK RFAENSVREG GRRAASGSRS
501: RHTVPVDSSP APADV
101: ACDLVGPRLA SAAIILLTTP AVYCTSIINS ASSFLLARFF TGFSLASFVS TQFWMSSMFS APKVGLANGV AGGWGNLGGG AVQLLMPFVF EAVRKMGSTK
201: FVAWRVAFFI PGIMQTVSAI AVLALGQDMP DGNYRKLHKS GEMHKDSFGN VLRHAVTNYR AWILALTYGY SFGVELAVDN IVAEYFYDRF DVNLKTAGLI
301: AATFGLANIV SRPGGGLMSD WLSQRYGMRG RLWGLWVMQT IGGVLCVVLG IVDYSFGASV AVMILFSLFC QAACGLTFGI VPFVSRRSLG LISGMTGGGG
401: NVGAVLTQVI FFRGGKYKTE TGIMYMGIMI LACTLPVAFI YFPQWGGMLA GPRKGATADD YYNGEWTAEE REKGYNAATK RFAENSVREG GRRAASGSRS
501: RHTVPVDSSP APADV
001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
Arabidopsis Description
NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.