Factsheet for TraesCS1D01G035700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G002800.1	Wheat	plasma membrane	96.91	97.48
TraesCS3D01G254900.1	Wheat	plasma membrane	88.42	89.11
EES01339	Sorghum	plasma membrane	83.01	83.5
Zm00001d011679_P001	Maize	plasma membrane	82.24	81.92
Os01t0704100-02	Rice	plasma membrane	79.92	80.23
GSMUA_Achr4P13270_001	Banana	plasma membrane	65.83	74.29
GSMUA_Achr4P06400_001	Banana	plasma membrane	64.48	72.61
PGSC0003DMT400043794	Potato	plasma membrane	66.02	68.4
VIT_01s0127g00070.t01	Wine grape	plasma membrane	65.44	67.13
KRG99396	Soybean	plasma membrane	65.06	66.08
KRH45628	Soybean	plasma membrane	62.93	64.17
CDY34599	Canola	plasma membrane	61.0	63.45
CDY21075	Canola	plasma membrane	61.0	63.33
AT1G12940.1	Thale cress	plasma membrane	60.42	62.35
TraesCS6D01G035900.1	Wheat	plasma membrane	53.09	54.24
TraesCS6D01G035700.1	Wheat	plasma membrane	52.9	54.04
TraesCS6D01G035800.1	Wheat	plasma membrane	52.9	54.04
TraesCS6D01G037800.1	Wheat	plasma membrane	52.12	53.25
TraesCS6D01G037200.1	Wheat	golgi, plasma membrane, plastid	52.12	53.15
TraesCS6D01G037300.1	Wheat	golgi, plasma membrane, plastid	52.12	53.15
TraesCS2D01G073500.1	Wheat	plasma membrane	51.16	53.11
TraesCS6D01G038200.1	Wheat	plasma membrane	51.93	52.95
TraesCS6D01G038300.1	Wheat	plasma membrane	51.93	52.95
TraesCS6D01G037900.1	Wheat	plasma membrane	51.93	52.85
TraesCS6D01G038100.1	Wheat	golgi, plasma membrane, vacuole	51.74	52.65
TraesCS6D01G035600.1	Wheat	plasma membrane	51.74	52.65
TraesCS6D01G038000.1	Wheat	plasma membrane	51.35	52.47
Bra016747.1-P	Field mustard	plasma membrane	53.28	48.0
TraesCS7D01G420900.1	Wheat	golgi, peroxisome, plasma membrane	40.73	43.69

Protein Annotations

EnsemblPlants:TraesCS1D01G035700.1	EnsemblPlantsGene:TraesCS1D01G035700	Gene3D:1.20.1250.20	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom
InterPro:MFS_trans_sf	PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	PFAM:PF07690	SEG:seg	SUPFAM:SSF103473
TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.10	MapMan:25.1.3.1	:	:

Description

No Description!

Coordinates

chr1D:+:16504613..16506169

Molecular Weight (calculated)

55475.2 Da

IEP (calculated)

8.834

GRAVY (calculated)

0.362

Length

518 amino acids

Sequence
(BLAST)

001: MEGASNWGPA AMEVQAAPKA KFKIPVDDDS KATEFWLFSF SRSHMSAFHL SWFSFFCCFV STFAAPPLMP LIRDNLGLTA KDIGNAGVAS VSGAVFARLA
101: MGTACDLVGP RLASAAIILL TTPAVYCTSI INSASSFLLA RFFTGFSLAS FVSTQFWMSS MFSAPKVGLA NGVAGGWGNL GGGAVQLLMP FVFEAVRKIG
201: STKFVAWRVA FFIPGIMQTV SAIAVLALGQ DMPDGNYRKL HKSGEMHKDS FGNVLRHAVT NYRAWILALT YGYSFGVELA VDNIVAEYFY DRFDVNLHTA
301: GLIAATFGLA NIVSRPGGGL MSDWLSQRYG MRGRLWGLWV MQTIGGVLCV VLGIVDYSFG ASVAVMILFS LFCQAACGLT FGIVPFVSRR SLGLISGMTG
401: GGGNVGAVLT QVIFFRGGKY KTETGIMYMG IMILACTLPV AFIYFPQWGG MLAGPRPGAT ADDYYNGEWT AEERDKGYNA ATKRFAENSV REGGRRAASG
501: SDSRHTVPVD GSPAPADV

Best Arabidopsis Sequence Match ( AT1G12940.1 )
(BLAST)

001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT

Arabidopsis Description

NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.