Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34599 | Canola | plasma membrane | 90.24 | 90.96 |
| CDY21075 | Canola | plasma membrane | 90.24 | 90.78 |
| VIT_01s0127g00070.t01 | Wine grape | plasma membrane | 74.3 | 73.86 |
| KRH45628 | Soybean | plasma membrane | 73.11 | 72.24 |
| KRG99396 | Soybean | plasma membrane | 73.11 | 71.96 |
| PGSC0003DMT400043794 | Potato | plasma membrane | 69.72 | 70.0 |
| GSMUA_Achr4P06400_001 | Banana | plasma membrane | 63.15 | 68.91 |
| Bra016747.1-P | Field mustard | plasma membrane | 77.29 | 67.48 |
| GSMUA_Achr4P13270_001 | Banana | plasma membrane | 61.16 | 66.88 |
| EES01339 | Sorghum | plasma membrane | 67.33 | 65.63 |
| Zm00001d011679_P001 | Maize | plasma membrane | 66.33 | 64.04 |
| TraesCS3D01G254900.1 | Wheat | plasma membrane | 64.94 | 63.42 |
| TraesCS3B01G285900.1 | Wheat | plasma membrane | 64.74 | 63.23 |
| TraesCS3A01G254000.1 | Wheat | plasma membrane | 64.54 | 63.03 |
| Os01t0704100-02 | Rice | plasma membrane | 64.54 | 62.79 |
| HORVU3Hr1G066090.1 | Barley | plasma membrane | 63.94 | 62.45 |
| TraesCSU01G002800.1 | Wheat | plasma membrane | 63.15 | 61.55 |
| TraesCS1D01G035700.1 | Wheat | plasma membrane | 62.35 | 60.42 |
| AT1G08090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 57.17 | 54.15 |
| AT1G08100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 56.18 | 54.02 |
| AT5G60770.1 | Thale cress | plasma membrane | 55.98 | 53.32 |
| AT4G14358.1 | Thale cress | cytosol | 9.16 | 52.87 |
| AT3G45060.1 | Thale cress | peroxisome | 55.78 | 51.66 |
| AT5G60780.1 | Thale cress | peroxisome | 54.78 | 51.02 |
| AT5G14570.1 | Thale cress | plastid | 47.81 | 48.68 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | EntrezGene:837852 | UniProt:A0A178WLN1 | ProteinID:AAF78499.1 |
| ProteinID:AEE28952.1 | ArrayExpress:AT1G12940 | EnsemblPlantsGene:AT1G12940 | RefSeq:AT1G12940 | TAIR:AT1G12940 | RefSeq:AT1G12940-TAIR-G |
| EnsemblPlants:AT1G12940.1 | TAIR:AT1G12940.1 | Symbol:ATNRT2.5 | Unigene:At.42054 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009705 | GO:GO:0009987 | GO:GO:0015112 |
| GO:GO:0015706 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0042128 | GO:GO:0055085 | GO:GO:0071249 |
| InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom | InterPro:MFS_trans_sf | RefSeq:NP_172754.1 | ProteinID:OAP19210.1 |
| PFAM:PF07690 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0009047 | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 |
| UniProt:Q9LPV5 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI000004823C | SEG:seg | : |
Description
NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
Coordinates
chr1:+:4416315..4418590
Molecular Weight (calculated)
54264.9 Da
IEP (calculated)
8.816
GRAVY (calculated)
0.384
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.