Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G285900.1 | Wheat | plasma membrane | 98.64 | 98.64 |
| TraesCS3D01G254900.1 | Wheat | plasma membrane | 98.25 | 98.25 |
| HORVU3Hr1G066090.1 | Barley | plasma membrane | 96.89 | 96.89 |
| EES01339 | Sorghum | plasma membrane | 87.74 | 87.57 |
| Zm00001d011679_P001 | Maize | plasma membrane | 86.38 | 85.38 |
| Os01t0704100-02 | Rice | plasma membrane | 84.05 | 83.72 |
| GSMUA_Achr4P13270_001 | Banana | plasma membrane | 67.9 | 76.03 |
| GSMUA_Achr4P06400_001 | Banana | plasma membrane | 66.73 | 74.57 |
| PGSC0003DMT400043794 | Potato | plasma membrane | 67.12 | 69.0 |
| VIT_01s0127g00070.t01 | Wine grape | plasma membrane | 67.32 | 68.51 |
| KRG99396 | Soybean | plasma membrane | 66.73 | 67.25 |
| CDY21075 | Canola | plasma membrane | 64.4 | 66.33 |
| CDY34599 | Canola | plasma membrane | 64.01 | 66.06 |
| KRH45628 | Soybean | plasma membrane | 64.59 | 65.35 |
| AT1G12940.1 | Thale cress | plasma membrane | 63.03 | 64.54 |
| TraesCS6A01G030900.1 | Wheat | plasma membrane | 55.45 | 56.21 |
| TraesCS6A01G031000.1 | Wheat | plasma membrane | 55.25 | 56.02 |
| TraesCS6A01G030800.1 | Wheat | plasma membrane | 55.06 | 55.82 |
| TraesCS6A01G030700.1 | Wheat | plastid | 54.86 | 55.62 |
| TraesCS6A01G031100.1 | Wheat | plastid | 54.86 | 55.62 |
| TraesCS6A01G031200.1 | Wheat | plasma membrane | 53.31 | 53.83 |
| TraesCS6A01G033000.1 | Wheat | plasma membrane | 53.31 | 53.83 |
| TraesCS6A01G032400.1 | Wheat | plastid | 53.11 | 53.74 |
| TraesCS6A01G032500.1 | Wheat | plastid | 52.92 | 53.54 |
| TraesCS6A01G032900.1 | Wheat | golgi, plasma membrane, vacuole | 52.92 | 53.44 |
| TraesCS6A01G033200.1 | Wheat | plasma membrane | 52.72 | 53.35 |
| TraesCS6A01G033100.1 | Wheat | plasma membrane | 52.33 | 52.95 |
| TraesCS6A01G032800.1 | Wheat | plasma membrane | 51.75 | 52.47 |
| TraesCS2A01G074800.1 | Wheat | plasma membrane | 50.39 | 51.59 |
| Bra016747.1-P | Field mustard | plasma membrane | 55.84 | 49.91 |
| TraesCS7A01G428500.1 | Wheat | golgi, peroxisome, plasma membrane | 37.74 | 41.45 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015706 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF07690 | PFscan:PS50850 |
| PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 | SUPFAM:SSF103473 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G254000 | EnsemblPlants:TraesCS3A01G254000.1 |
| TIGR:cd06174 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:475304797..475306341
Molecular Weight (calculated)
55407.2 Da
IEP (calculated)
8.684
GRAVY (calculated)
0.366
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGESKPAAM GVQAAPKGKF RMPVDSDNKA TEFWLFSFAR PHMSAFHLSW FSFFCCFVST FAAPPLLPLI RDNLGLTGKD IGNAGIASVS GAVFARLAMG
101: TACDLVGPRL ASAAIILLTT PAVYCSAIID SASSFLLVRF FTGFSLASFV STQFWMSSMF SSPKVGLANG VAGGWGNLGG GAVQFIMPLV YEIVRKIGST
201: DFVAWRIAFF IPGIMQTFSA IAVLAFGQDM PDGNYRKLHK SGEMHKDSFG NVLRHAVTNY RAWILALTYG YCFGVELAVD NIVAQYFYDR FDVNLHTAGL
301: IAASFGMANI ISRPGGGLMS DWLSDRFGMR GRLWGLWVVQ TIGGVLCVVL GVVDYSFGAS VAVMILFSFF VQAACGLTFG IVPFVSRRSL GLISGMTGGG
401: GNVGAVLTQV IFFRGTKYKT ETGIMYMGLM ILACTLPITL IYFPQWGGMF AGPRKGATAE EYYSQEWTEE ERAKGYSAAT ERFAENSVRE GGRRAASGSQ
501: SRHTVPVDGS PADV
101: TACDLVGPRL ASAAIILLTT PAVYCSAIID SASSFLLVRF FTGFSLASFV STQFWMSSMF SSPKVGLANG VAGGWGNLGG GAVQFIMPLV YEIVRKIGST
201: DFVAWRIAFF IPGIMQTFSA IAVLAFGQDM PDGNYRKLHK SGEMHKDSFG NVLRHAVTNY RAWILALTYG YCFGVELAVD NIVAQYFYDR FDVNLHTAGL
301: IAASFGMANI ISRPGGGLMS DWLSDRFGMR GRLWGLWVVQ TIGGVLCVVL GVVDYSFGAS VAVMILFSFF VQAACGLTFG IVPFVSRRSL GLISGMTGGG
401: GNVGAVLTQV IFFRGTKYKT ETGIMYMGLM ILACTLPITL IYFPQWGGMF AGPRKGATAE EYYSQEWTEE ERAKGYSAAT ERFAENSVRE GGRRAASGSQ
501: SRHTVPVDGS PADV
001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
Arabidopsis Description
NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.