CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011679_P001	Maize	plasma membrane	94.17	93.27
TraesCS3A01G254000.1	Wheat	plasma membrane	87.57	87.74
TraesCS3D01G254900.1	Wheat	plasma membrane	86.99	87.16
TraesCS3B01G285900.1	Wheat	plasma membrane	86.8	86.97
HORVU3Hr1G066090.1	Barley	plasma membrane	86.8	86.97
Os01t0704100-02	Rice	plasma membrane	85.44	85.27
TraesCSU01G002800.1	Wheat	plasma membrane	83.69	83.69
TraesCS1D01G035700.1	Wheat	plasma membrane	83.5	83.01
GSMUA_Achr4P13270_001	Banana	plasma membrane	67.96	76.25
GSMUA_Achr4P06400_001	Banana	plasma membrane	65.83	73.7
VIT_01s0127g00070.t01	Wine grape	plasma membrane	69.13	70.5
PGSC0003DMT400043794	Potato	plasma membrane	66.99	69.0
KRG99396	Soybean	plasma membrane	68.16	68.82
KRH45628	Soybean	plasma membrane	66.6	67.52
CDY21075	Canola	plasma membrane	65.24	67.33
AT1G12940.1	Thale cress	plasma membrane	65.63	67.33
CDY34599	Canola	plasma membrane	64.66	66.87
EES04351	Sorghum	golgi, peroxisome, plasma membrane	53.2	51.99
EES06135	Sorghum	golgi, peroxisome, plasma membrane	53.01	51.8
EES04350	Sorghum	plastid	53.79	51.78
Bra016747.1-P	Field mustard	plasma membrane	56.7	50.78
OQU87011	Sorghum	plasma membrane	42.52	45.25

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	EntrezGene:8069516	UniProt:C5XHL4	EnsemblPlants:EES01339
ProteinID:EES01339	ProteinID:EES01339.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0009705	GO:GO:0009987	GO:GO:0015112	GO:GO:0015706	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:0071249	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF07690	PFscan:PS50850	PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	EnsemblPlantsGene:SORBI_3003G270800	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0001A847B6	RefSeq:XP_002456219.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:60744743..60746865

Molecular Weight (calculated)

55268.2 Da

IEP (calculated)

8.844

GRAVY (calculated)

0.405

Length

515 amino acids

Sequence
(BLAST)

001: MAEAELKPSA MQVEAAEAAS KPRFRMPVDS DNKATEFWLF SLARPHMSAF HLSWFSFFCC FLSTFAAPPL LPLIRDTLGL TATDIGNAGI ASVSGAVFAR
101: VAMGTACDLV GPRLASAAII LLTTPAVYCS AIIDSPSSFL LVRFFTGFSL ASFVSTQFWM SSMFSPPKVG LANGVAGGWG NLGGGAVQLI MPLVYEAIRK
201: IGSTPFTAWR VAFFIPGLLQ TLSAIAVLAF GQDMPDGNYR KLHKSGDMHK DSFGNVLRHA VTNYRAWVLA LTYGYCFGVE LAVDNIIAQY FYDRFGVKLS
301: TAGFIAASFG MANIISRPGG GLMSDWLSTR FGMRGRLWGL WVVQTIGGVL CVVLGAVDYS FAASVAVMIL FSLFVQAACG LTFGIVPFVS RRSLGLISGM
401: TGGGGNVGAV LTQLIFFHGS KYKTETGIKY MGLMIIACTL PIALIYFPQW GGMFVGPQPG ATAEDYYNRE WTAHEREKGF NAGSVRFAEN SVREGGRSGS
501: QSKHTVPVES SPADV

Best Arabidopsis Sequence Match ( AT1G12940.1 )
(BLAST)

001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT

Arabidopsis Description

NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.