Factsheet for Bra021279.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61287	Canola	plasma membrane	79.72	86.04
Bra001068.1-P	Field mustard	plasma membrane	24.65	18.5
Os04t0117500-00	Rice	plasma membrane	8.57	17.13
Bra040606.1-P	Field mustard	cytosol, plasma membrane, vacuole	24.3	16.77
PGSC0003DMT400037608	Potato	plastid	18.18	16.69
HORVU3Hr1G068040.1	Barley	plasma membrane	12.24	16.36
KRH61886	Soybean	plasma membrane	17.66	16.16
Solyc08g068000.1.1	Tomato	plasma membrane	17.83	15.86
PGSC0003DMT400065964	Potato	cytosol, plastid	17.48	15.85
Bra036395.1-P	Field mustard	cytosol	22.55	15.79
Solyc01g010080.2.1	Tomato	plastid	17.31	15.76
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	10.14	15.55
Bra037049.1-P	Field mustard	plastid	17.48	15.5
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	16.96	15.37
Bra011367.1-P	Field mustard	plastid	17.48	15.36
GSMUA_Achr1P05260_001	Banana	plasma membrane	16.61	15.01
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	16.78	15.0
KRH52547	Soybean	cytosol	15.56	14.98
Bra017567.1-P	Field mustard	plasma membrane	17.13	14.92
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	17.31	14.86
GSMUA_Achr5P09770_001	Banana	plasma membrane	16.96	14.85
TraesCS3D01G246300.1	Wheat	plastid	15.21	14.62
Zm00001d011729_P002	Maize	cytosol	15.91	14.38
Bra013296.1-P	Field mustard	plasma membrane	17.13	14.26
OQU87429	Sorghum	mitochondrion	15.56	14.24
TraesCS3A01G245200.1	Wheat	mitochondrion	14.86	14.14
Os06t0254200-00	Rice	plasma membrane, plastid	14.69	13.77
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	14.16	13.48
Zm00001d016987_P001	Maize	plasma membrane	13.46	13.07
Bra013599.1-P	Field mustard	cytosol	19.41	12.88
Bra021012.1-P	Field mustard	plasma membrane	15.73	12.64
TraesCS3B01G274500.1	Wheat	plastid	14.16	12.52
Bra011351.1-P	Field mustard	cytosol	19.06	12.44
Bra032037.1-P	Field mustard	cytosol	18.53	12.33
Bra007785.1-P	Field mustard	cytosol	18.18	12.01

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra021279
EnsemblPlants:Bra021279.1	EnsemblPlants:Bra021279.1-P	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR020683
InterPro:IPR036770	InterPro:K_chnl_dom	UniProt:M4DXN3	PFAM:PF07885	PFscan:PS50297	PANTHER:PTHR10217
PANTHER:PTHR10217:SF514	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI00025453F6
InterPro:cNMP-bd-like	SEG:seg	:	:	:	:

Description

AT5G37500 (E=3e-031) GORK | GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL); cyclic nucleotide binding / inward rectifier potassium channel/ outward rectifier potassium channel

Coordinates

chrA01:+:22824199..22827275

Molecular Weight (calculated)

64978.6 Da

IEP (calculated)

8.703

GRAVY (calculated)

-0.203

Length

572 amino acids

Sequence
(BLAST)

001: MARLRQRKNS DPENFTQGGG RAAGGATRGG RAARGAIGGG RGGNNNIPRA GGTYTPGDAN LDIMRIIQEE AQKRDEDITK GGEDTGNGRK KKKKKKNRVN
101: DNTNVNNRNL IWFYLLGIFA TYSSVMAPLT CAFNAEEYLP YQLIIVMEFA FIVDILRGWI YAYHDNQPIA NDRFLHWCYR IWLLNPRKLE LVAVAAVPLA
201: NIIQWEYLRW INIVRAMRGK ELLEKLEKVE SFNYAFIMFI KIMAIQLYCI HTTGCMFYQL ATDFEGLPQI YQTWMSDIQI GNQNLSGLGN VQKYIASTYF
301: ATVTLSTVGY GDIHATNLTE MVALACLIIV SLTVWTYLGV QLANLFGRRS KKQIVGEKMD NLEKYLKEAK IAENLAEDIR GHMQMKYSDD YDRKILEDVP
401: ACLIAKELLQ GETVHPPLRR PTTVFGLESF VLNEPLPHTI RTYKASKFLI ISKKYFMECL HNYLEDGASV MRNLSNGRDP AFVERLLQSV FGIQMQNDVI
501: RKASLLNHAI FFDDLEKVKK LIHWGVSVDS VDYNNIKPLD FAINRGNTEI IKFLMSVVAE TNTTGIDQEH AD

Best Arabidopsis Sequence Match ( AT3G02850.2 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKG SFIGI

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.