Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, mitochondrion
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G294000.1 | Wheat | mitochondrion, plasma membrane | 98.2 | 97.81 |
| TraesCS3B01G328800.1 | Wheat | plasma membrane | 97.8 | 96.83 |
| HORVU3Hr1G072850.15 | Barley | plastid | 87.6 | 85.55 |
| Os01t0756700-01 | Rice | plasma membrane | 81.2 | 80.88 |
| EES01496 | Sorghum | mitochondrion, plasma membrane | 81.0 | 76.42 |
| Bra017567.1-P | Field mustard | plasma membrane | 61.8 | 47.03 |
| CDY35154 | Canola | plasma membrane | 61.8 | 47.03 |
| CDY03233 | Canola | plasma membrane | 61.6 | 46.95 |
| AT5G46240.1 | Thale cress | plasma membrane | 61.4 | 45.35 |
| CDY33464 | Canola | cytosol, plasma membrane, plastid | 60.2 | 45.2 |
| Bra025028.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 60.0 | 45.05 |
| CDY62359 | Canola | cytosol, plasma membrane, plastid | 59.6 | 44.74 |
| CDX99479 | Canola | plasma membrane | 61.0 | 44.53 |
| CDX78839 | Canola | plasma membrane | 60.6 | 44.3 |
| Bra013296.1-P | Field mustard | plasma membrane | 60.6 | 44.1 |
| Solyc08g016500.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 58.4 | 42.75 |
| KRH44805 | Soybean | plasma membrane | 61.8 | 42.45 |
| AT4G18290.2 | Thale cress | mitochondrion, plasma membrane | 60.0 | 42.37 |
| Solyc02g070530.2.1 | Tomato | nucleus | 58.2 | 42.3 |
| TraesCS6A01G160500.1 | Wheat | plasma membrane | 61.4 | 42.29 |
| PGSC0003DMT400054339 | Potato | plasma membrane | 57.6 | 41.86 |
| PGSC0003DMT400024968 | Potato | cytosol, plasma membrane, vacuole | 57.2 | 41.51 |
| TraesCS3A01G132400.1 | Wheat | plasma membrane | 59.2 | 41.17 |
| KRH21063 | Soybean | plasma membrane | 62.0 | 39.9 |
| VIT_10s0003g03270.t01 | Wine grape | plasma membrane | 62.4 | 39.44 |
| KRH11194 | Soybean | plasma membrane | 61.2 | 39.38 |
| Zm00001d012717_P002 | Maize | plasma membrane | 80.6 | 39.09 |
| CDX76529 | Canola | plasma membrane | 55.2 | 38.76 |
| KRH58233 | Soybean | cytosol, extracellular, plasma membrane | 17.2 | 38.74 |
| Bra021012.1-P | Field mustard | plasma membrane | 55.0 | 38.62 |
| Solyc03g058900.1.1 | Tomato | cytosol | 14.8 | 37.95 |
| TraesCS3A01G245200.1 | Wheat | mitochondrion | 42.0 | 34.94 |
| CDY34066 | Canola | endoplasmic reticulum, plasma membrane | 40.6 | 33.55 |
| TraesCS3A01G233800.1 | Wheat | plasma membrane | 56.2 | 31.33 |
| PGSC0003DMT400054318 | Potato | nucleus | 19.4 | 30.79 |
| TraesCS1A01G267900.1 | Wheat | plastid | 49.4 | 28.46 |
| TraesCS2A01G321100.1 | Wheat | plastid | 51.4 | 28.18 |
| PGSC0003DMT400024866 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 13.8 | 23.88 |
| TraesCS2A01G312800.1 | Wheat | plasma membrane | 32.0 | 22.13 |
| TraesCS7A01G200100.1 | Wheat | cytosol | 34.4 | 20.67 |
| TraesCS7A01G200200.1 | Wheat | cytosol, plasma membrane, vacuole | 34.4 | 20.53 |
| TraesCS7A01G199900.1 | Wheat | cytosol | 33.0 | 19.43 |
Protein Annotations
| Gene3D:1.10.287.70 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 |
| GO:GO:0005249 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006813 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0055085 | InterPro:IPR000595 | InterPro:IPR014710 | InterPro:Ion_trans_dom | InterPro:K_chnl_volt-dep_EAG/ELK/ERG |
| PFAM:PF00027 | PFAM:PF00520 | PRINTS:PR01463 | PFscan:PS50042 | PANTHER:PTHR10217 | PANTHER:PTHR10217:SF619 |
| InterPro:RmlC-like_jellyroll | SMART:SM00100 | SUPFAM:SSF51206 | SUPFAM:SSF81324 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G294200 |
| EnsemblPlants:TraesCS3A01G294200.1 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | TIGR:cd00038 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:-:527838732..527841069
Molecular Weight (calculated)
57211.4 Da
IEP (calculated)
8.321
GRAVY (calculated)
0.067
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSSRARTG SRVTRCFPCY DGDRTGDFSG CPNDLLPSLG ATAAAQPTSG KYLVSPYGRR YRVWETFLIL LVVYSAWICP LEFAFLRHLP RAPFVVDDVV
101: NGFFAVDILL TFFVPYVDNR SYLVVDDPKK IALRYLSTWF IFDVCSTVPF RSITRLFTRH EHSLGLKFLN VLRLWRLRRV SSLFARLEKD IRFNYAVIRC
201: TKLISVTLFA VHCAGCINYL IADRYPDPAR TWIGAAHPDF REDGLWVRYV TCLYWSITTM TTTGYGDLHA QNAREMLFGI SYMLFNLWLT AYLIGNMTNL
301: VVHSTSRTRD FRDMVQAATE FAARNQLPRQ IEEQMLNHIC LRFKAEGLKQ QDTLDILPKA MRSSISLYLF FPVVQGAYLF RGVSPSFIQQ LVTEMVAEYY
401: APKEDIILQN EYPSDLHLLV TGEVDIVAFL DGTEQVYGKA TEGGLLGEIG VLCNKPQPFT FRTAKLSQVL RISRPKLMDI IQENAEDGEI IRINLEQVNV
101: NGFFAVDILL TFFVPYVDNR SYLVVDDPKK IALRYLSTWF IFDVCSTVPF RSITRLFTRH EHSLGLKFLN VLRLWRLRRV SSLFARLEKD IRFNYAVIRC
201: TKLISVTLFA VHCAGCINYL IADRYPDPAR TWIGAAHPDF REDGLWVRYV TCLYWSITTM TTTGYGDLHA QNAREMLFGI SYMLFNLWLT AYLIGNMTNL
301: VVHSTSRTRD FRDMVQAATE FAARNQLPRQ IEEQMLNHIC LRFKAEGLKQ QDTLDILPKA MRSSISLYLF FPVVQGAYLF RGVSPSFIQQ LVTEMVAEYY
401: APKEDIILQN EYPSDLHLLV TGEVDIVAFL DGTEQVYGKA TEGGLLGEIG VLCNKPQPFT FRTAKLSQVL RISRPKLMDI IQENAEDGEI IRINLEQVNV
001: MEKKKVWFWG VKDDGEGGGG RGGGRTKDAE DDVADHLSRD GTMSQYSLSK GLLPSLGANN RSSRDVILPR FIVSPFDPRY RAWETFLVFL VLYTAWASPF
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP
Arabidopsis Description
AKT6Potassium channel AKT6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXE6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.