Factsheet for TraesCS1D01G267800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G267900.1
TraesCS1B01G278600.1
TraesCS1D01G267800.1
TraesCS3A01G132400.1
TraesCS3A01G233800.1
TraesCS3A01G245200.1
TraesCS3A01G294200.1
TraesCS3A01G362200.1
TraesCS3B01G167100.1
TraesCS3B01G265500.1
TraesCS3B01G274500.1
TraesCS3B01G328800.1
TraesCS3B01G394600.3
TraesCS3D01G148600.1
TraesCS3D01G219600.1
TraesCS3D01G246300.1
TraesCS3D01G294000.1
TraesCS3D01G355900.1
TraesCS4A01G094300.1
TraesCS4B01G210100.1
TraesCS4D01G210900.1
TraesCS5A01G183600.1
TraesCS5B01G182000.1
TraesCS5D01G188600.1
TraesCS6A01G160500.1
TraesCS6B01G081300.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22200.1	TraesCS3A01G233800.1	AT2G26650.1	12678562
AT4G22200.1	TraesCS3B01G265500.1	AT2G26650.1	12678562
AT4G22200.1	TraesCS3D01G219600.1	AT2G26650.1	12678562
AT4G22200.1	TraesCS3A01G233800.1	AT2G26650.1	15299147
AT4G22200.1	TraesCS3B01G265500.1	AT2G26650.1	15299147
AT4G22200.1	TraesCS3D01G219600.1	AT2G26650.1	15299147
AT4G22200.1	TraesCS3A01G362200.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS3B01G394600.3	AT3G11410.1	11181729
AT4G22200.1	TraesCS3D01G355900.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS4A01G094300.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS4B01G210100.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS4D01G210900.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS5A01G183600.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS5B01G182000.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS5D01G188600.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS3A01G362200.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS3B01G394600.3	AT3G11410.1	12034902
AT4G22200.1	TraesCS3D01G355900.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS4A01G094300.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS4B01G210100.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS4D01G210900.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS5A01G183600.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS5B01G182000.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS5D01G188600.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS1A01G267900.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS1B01G278600.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS1D01G267800.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS6B01G081300.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS1A01G267900.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS1B01G278600.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS1D01G267800.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS6B01G081300.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS1A01G267900.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS1B01G278600.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS1D01G267800.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS6B01G081300.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS3A01G245200.1	AT4G32650.1	12678562
AT4G22200.1	TraesCS3B01G274500.1	AT4G32650.1	12678562
AT4G22200.1	TraesCS3D01G246300.1	AT4G32650.1	12678562
AT4G22200.1	TraesCS3A01G132400.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3A01G294200.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3B01G167100.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3B01G328800.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3D01G148600.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3D01G294000.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS6A01G160500.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS6B01G190900.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS6D01G152200.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS6D01G152200.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3A01G132400.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3A01G294200.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3B01G167100.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3B01G328800.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3D01G148600.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3D01G294000.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS6A01G160500.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS6B01G190900.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS6D01G152200.1	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G278600.1	Wheat	plasma membrane, plastid	97.46	97.46
TraesCS1A01G267900.1	Wheat	plastid	96.3	95.97
HORVU1Hr1G065250.2	Barley	plastid	91.56	89.19
KXG22060	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	61.97	77.12
Os05t0428700-01	Rice	cytosol, plastid	50.17	76.68
Zm00001d010210_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	61.39	75.97
Zm00001d010209_P001	Maize	plastid	11.91	73.57
EES19575	Sorghum	plastid	71.1	73.48
KXG22062	Sorghum	plastid	13.41	72.96
KXG22064	Sorghum	plastid	70.52	72.45
Zm00001d038252_P001	Maize	plastid	73.06	67.67
GSMUA_Achr6P24240_001	Banana	cytosol	61.39	66.38
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	60.12	63.11
KRH26375	Soybean	cytosol	57.57	59.93
VIT_12s0034g02240.t01	Wine grape	cytosol, mitochondrion, plasma membrane	57.8	59.59
CDX79135	Canola	plasma membrane	54.22	59.52
KRH44060	Soybean	cytosol	56.99	59.11
AT4G22200.1	Thale cress	cytosol, plastid, vacuole	54.22	58.48
Solyc01g104030.2.1	Tomato	cytosol	54.68	56.51
PGSC0003DMT400061090	Potato	cytosol	53.76	56.43
PGSC0003DMT400062100	Potato	plasma membrane	53.18	54.63
Bra013599.1-P	Field mustard	cytosol	54.22	54.41
CDX82921	Canola	cytosol	53.87	54.06
Solyc10g024360.1.1	Tomato	cytosol	52.25	53.75
TraesCS3D01G294000.1	Wheat	mitochondrion, plasma membrane	28.44	49.0
TraesCS6D01G152200.1	Wheat	plasma membrane	33.41	39.81
TraesCS3D01G148600.1	Wheat	plasma membrane	32.72	39.36
TraesCS3D01G219600.1	Wheat	plasma membrane	39.65	38.24
TraesCS2D01G342500.1	Wheat	mitochondrion, plastid	38.84	37.21
TraesCS3D01G246300.1	Wheat	plastid	25.32	36.81
TraesCS7D01G203200.1	Wheat	cytosol, plasma membrane, vacuole	28.32	29.81
TraesCS7D01G203100.1	Wheat	cytosol	28.44	29.67
TraesCS2D01G311300.1	Wheat	plasma membrane	26.01	29.61
TraesCS7D01G202900.1	Wheat	plasma membrane	27.51	29.1

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009506
GO:GO:0009719	GO:GO:0009737	GO:GO:0016020	GO:GO:0042391	GO:GO:0042802	GO:GO:0055085
InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PFAM:PF12796	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490
PANTHER:PTHR10217	PANTHER:PTHR10217:SF493	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G267800	EnsemblPlants:TraesCS1D01G267800.1	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	TIGR:cd00038	TIGR:cd00204	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:-:363723218..363729023

Molecular Weight (calculated)

96146.9 Da

IEP (calculated)

7.727

GRAVY (calculated)

-0.034

Length

865 amino acids

Sequence
(BLAST)

001: MKISSFQSAS SGGASAASGS STGFGSGSGA SRSFNLRNLS KLMLPPLGSS LSQSTSDSDK RVVSPLDSRY RCWETFMVIL VAYSAWVYPF EVAFMEARPK
101: GGLEVADMVV DIFFAVDIVL TFFVAYIDSR TQLLVRDRRR ITFRYLSTFF IMDVASTIPY QGIAYLVNGE VREGMVYSLL GLLRLWRLRK VKQFFTRLEK
201: DIRFSYFWVR CARLIAVTLF LVHCAGCLYY LLADRYPDRD KTWIGAVIPN FRQESLWIRY ISSIYWSITT MTTVGYGDLH AQNNLEMIFN IFYMLFNLGL
301: TAYLIGNMTN LVVEGTRRTM EFRNSIRAAS NFVCRNHLPP RLQQQILAYM CLKFRAESLN QQQLMDQLPK SICKSICEHL FLPVVKEVYL FKGISREAQL
401: LLVTKTKPEY IPPKEDVIVQ NEAADDVYIV VSGEVEIVYF NGEREEVMGK LGTMDIFGEV SALSDRPQTF TFRTRTLSQL LRLKQATLRE VMQSKPDDSA
501: LIVRNFLKHQ IEVHDMKDLL GESTGAGGCG NIVPCNLLTV AATGNAGFLE DLLKVGMDPD VGDSKGRTAL HIAASKGYEG CVQALLMHGC NINIKDAQGN
601: TALWQAIAAR HHKVFSNLYH VARVSNPRAA GDLLCLAARR GDVDTLRELL KHGLDVDTED HDGSTALRVA LSEGQADAAR FLVMNGASVD KADLDGDGSA
701: PRQTTVPAAE LRELVKRREV GHPITIYDSP ASTVTAASSS SGELRQGRFQ GSTRSDSAHW PRVSIYKGHP FVRNHSSEAG KLINLPATME EFKTIIGEKL
801: KVDTEKALIL NGEGAEIDSL DVIRDNDKLF IVTEEHMRML ASMDSSVALS HTSSVGSAVS VAHVI

Best Arabidopsis Sequence Match ( AT4G22200.1 )
(BLAST)

001: MDLKYSASHC NLSSDMKLRR FHQHRGKGRE EEYDASSLSL NNLSKLILPP LGVASYNQNH IRSSGWIISP MDSRYRCWEF YMVLLVAYSA WVYPFEVAFL
101: NSSPKRNLCI ADNIVDLFFA VDIVLTFFVA YIDERTQLLV REPKQIAVRY LSTWFLMDVA STIPFDAIGY LITGTSTLNI TCNLLGLLRF WRLRRVKHLF
201: TRLEKDIRYS YFWIRCFRLL SVTLFLVHCA GCSYYLIADR YPHQGKTWTD AIPNFTETSL SIRYIAAIYW SITTMTTVGY GDLHASNTIE MVFITVYMLF
301: NLGLTAYLIG NMTNLVVEGT RRTMEFRNSI EAASNFVNRN RLPPRLKDQI LAYMCLRFKA ESLNQQHLID QLPKSIYKSI CQHLFLPSVE KVYLFKGVSR
401: EILLLLVSKM KAEYIPPRED VIMQNEAPDD VYIIVSGEVE IIDSEMERES VLGTLRCGDI FGEVGALCCR PQSYTFQTKS LSQLLRLKTS FLIETMQIKQ
501: QDNATMLKNF LQHHKKLSNL DIGDLKAQQN GENTDVVPPN IASNLIAVVT TGNAALLDEL LKAKLSPDIT DSKGKTPLHV AASRGYEDCV LVLLKHGCNI
601: HIRDVNGNSA LWEAIISKHY EIFRILYHFA AISDPHIAGD LLCEAAKQNN VEVMKALLKQ GLNVDTEDHH GVTALQVAMA EDQMDMVNLL ATNGADVVCV
701: NTHNEFTPLE KLRVVEEEEE EERGRVSIYR GHPLERRERS CNEAGKLILL PPSLDDLKKI AGEKFGFDGS ETMVTNEDGA EIDSIEVIRD NDKLYFVVNK
801: II

Arabidopsis Description

AKT2Potassium channel AKT2/3 [Source:UniProtKB/Swiss-Prot;Acc:Q38898]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.