Factsheet for TraesCS7D01G202900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G199900.1	Wheat	cytosol	96.09	92.58
TraesCS7B01G106600.1	Wheat	cytosol	83.01	92.51
HORVU7Hr1G040880.7	Barley	cytosol, plasma membrane	84.84	89.66
TraesCS7D01G203100.1	Wheat	cytosol	82.27	81.18
TraesCS7D01G203200.1	Wheat	cytosol, plasma membrane, vacuole	76.41	76.03
KXG19708	Sorghum	cytosol	75.06	71.9
Os06t0250600-01	Rice	cytosol	74.94	71.45
Zm00001d037289_P002	Maize	cytosol	74.21	69.61
Zm00001d044717_P001	Maize	cytosol	73.23	68.15
GSMUA_Achr8P22950_001	Banana	cytosol	44.5	67.28
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	54.28	60.74
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	62.47	60.47
Solyc03g097940.2.1	Tomato	plasma membrane	54.77	57.66
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	56.97	55.74
KRH60563	Soybean	mitochondrion, plasma membrane	48.53	50.96
TraesCS2D01G311300.1	Wheat	plasma membrane	44.99	48.42
TraesCS3D01G294000.1	Wheat	mitochondrion, plasma membrane	19.8	32.27
TraesCS1D01G267800.1	Wheat	plastid	29.1	27.51
TraesCS3D01G246300.1	Wheat	plastid	19.8	27.23
TraesCS3D01G219600.1	Wheat	plasma membrane	28.97	26.42
TraesCS6D01G152200.1	Wheat	plasma membrane	23.11	26.03
TraesCS3D01G148600.1	Wheat	plasma membrane	22.86	26.01
TraesCS2D01G342500.1	Wheat	mitochondrion, plastid	26.77	24.25

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01415	PRINTS:PR01463
PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478
InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G202900	EnsemblPlants:TraesCS7D01G202900.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	TIGR:cd00038
TIGR:cd00204	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:161291943..161297588

Molecular Weight (calculated)

93578.2 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.134

Length

818 amino acids

Sequence
(BLAST)

001: MGRWLRPNRR VGEEEEEAEE EYQVDVLPDR LKSSRSSRAP SLRSLSRLAD DEEGGFLRGH IVHPDNEWYR IWTRFIVFWA AFSSFLTPLE FGFFRGLPWN
101: LFLLDMVGQI AFLIDIVLRF LVAYRDPVTL CIVYNPTSIA VRYCKSSFIF DLLGCFPWDV IYKACGRKEE VRYLLWIRMT RTQKVTQFFR DLEKDIRVNY
201: LFTRIVKLIV VELYFTHTAA CIFYYLATTL PESMEGYTWI GSLQLGDYSY SHFRDIDLTT RYITSMYFAI VTMTTVGYGD IHAVNLREMI FVMIYVSFGM
301: VLGAYLIGNM TAIIVKGSET ERFRDKMKEA IIYMNRHKLG KDIREQIKGH LRLQYESNRT EAAVLWDIPV SIRAKISQTL YMPYIERTPL FKGCSAEFLQ
401: QIVARLQEEF YLPEEVVLEQ GSVVDQLYFV CQGALKGVGI GKDGQEEASL MFEQGNSFGE IAILCNVPQP YNIRVCELCR LLRLDKESLT YILGIYFADE
501: RKLLSNLTES NEYGLRVKQI GPDIKFHIGK QEEELTLRVN TAAFHGELNQ LTDLIRAGVD PKNTDYDGRS PLHLAASKGY EEVAQFLIHE GVDINCTDNF
601: GNTPLLEAVK QGHDRVASLL FTKGAKLNLE NAGIHLCMAV SKRETDFIRG ALAYGADPNS KDYDHRHPLH IAAAEGLYIM AKLLVDAGAS VLVTDRRGTT
701: PLDEGRKSRS KPLIVLLEEA KTEELSKFPT RGEKVRDKIH QRLCSVFPCH PLNTDVKRKE GVMLWIPHTI NELIRSAQEK LGLSGSRLRL LCEDGAAVQE
801: VEMVSDGQKL YLVGDEDM

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [cytosol,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.