Factsheet for TraesCS2D01G342500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G321100.1	Wheat	plastid	94.8	93.86
TraesCSU01G182900.1	Wheat	mitochondrion, plasma membrane	61.9	80.2
HORVU2Hr1G083820.1	Barley	cytosol	61.57	76.9
EER95927	Sorghum	plastid	66.89	65.72
Zm00001d018918_P001	Maize	plastid	64.34	62.54
TraesCS3D01G219600.1	Wheat	plasma membrane	61.35	61.76
Zm00001d018924_P001	Maize	cytosol	26.14	52.91
Os07t0175400-00	Rice	plastid	41.42	52.6
TraesCS3D01G294000.1	Wheat	mitochondrion, plasma membrane	28.68	51.59
TraesCS6D01G152200.1	Wheat	plasma membrane	32.34	40.22
TraesCS3D01G246300.1	Wheat	plastid	25.69	38.99
TraesCS1D01G267800.1	Wheat	plastid	37.21	38.84
TraesCS3D01G148600.1	Wheat	plasma membrane	30.9	38.8
TraesCS2D01G311300.1	Wheat	plasma membrane	24.36	28.95
TraesCS7D01G203200.1	Wheat	cytosol, plasma membrane, vacuole	25.47	27.98
TraesCS7D01G203100.1	Wheat	cytosol	25.47	27.74
TraesCS7D01G202900.1	Wheat	plasma membrane	24.25	26.77

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710
InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG
PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01415
PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217
PANTHER:PTHR10217:SF526	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206
SUPFAM:SSF81324	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G342500	EnsemblPlants:TraesCS2D01G342500.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom
TIGR:cd00038	TIGR:cd00204	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:+:437947540..437951408

Molecular Weight (calculated)

100260.0 Da

IEP (calculated)

8.118

GRAVY (calculated)

-0.177

Length

903 amino acids

Sequence
(BLAST)

001: MTSGSRCAPW GRGGGVQSRG ESGGGRSFSV FTAILPSLGA HSNSFRQRSV RRWVVSPYDP RYRLWDSYLV CLVLYSAWVS PFEFGFLQNP HGALAIADNT
101: VNAFFAMDIV LTFFVAYTDK RTYLLVDDPA KIAWRYATTW LVLDVASTVP TELSRRILPP DLRTYGVFGM LRLWRLRRVG ALLSRMEKDR KFSYFWVRCS
201: KLVAVTLFAV HCSGCFYYLL ADRYPKPAET WISISMPQFH TESLWNRYVA SMYWSITTLT TVGYGDMHAV NSREMLFTTF YMLFNLGLTA YLIGNMTNLV
301: VHGTSRTRKY RDKIQAATSF AQRHELPERL QDQMISHLSL KFRTHSEGLQ QQETLDALPK ALRSSISHHL FFGLVQNVYL FQGVSNDLIF QLVSEMSAEY
401: FAPREDVILQ NEAPSDFYII VTGSVELLEI QNNGAEQLAS MAKSGEVISE IGVLCYRPQL FTARTKSLCQ LLRLDRADFL KVVQSNVGDA TIIMNNLIQY
501: LKEHKGDGVI SGIAKDIERM LATGQLDLPI TLCFAASRGD DFLMHQLLKR GLDPNEIDNC GRTALHIAAS NGSEQCVRRL LENGADANAR DPEGKVPLWE
601: ALCRRHQPVV QLLVEAGAVL SAGDGAMYAR VAVEEDDAVL LEEIARCGGD VAAACSSDGT TPLHRAVLDG NARMVRVLLE HGADPDRGDA RGLTPTALAD
701: RHAHADIQQL FASHRQQDQQ GAPKPSSTEE GVAVASTAPQ VTRFRSVPST RVLPPSGSVG SSPNRVGRQS NSSSARSTPQ RMASFRNSLF GVISSSFHGN
801: RHDGGGGTSF HHRHERNPIS SHVRVTISCP EQGRGERRLL VFVPETMLQL LELGGKRFGF APTRVITSDG AEIDDVRLVR DGDNLLLVSD QWAPDTTSAH
901: RNQ

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.