CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
plasma membrane 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018918_P001	Maize	plastid	81.61	80.73
Zm00001d018924_P001	Maize	cytosol	37.21	76.68
TraesCS2D01G342500.1	Wheat	mitochondrion, plastid	65.72	66.89
TraesCS2A01G321100.1	Wheat	plastid	65.61	66.12
EES03354	Sorghum	plastid	59.41	61.69
TraesCSU01G182900.1	Wheat	mitochondrion, plasma membrane	46.35	61.12
HORVU2Hr1G083820.1	Barley	cytosol	47.66	60.58
Os07t0175400-00	Rice	plastid	38.63	49.93
EES01496	Sorghum	mitochondrion, plasma membrane	28.07	48.68
OQU87429	Sorghum	mitochondrion	27.09	39.84
EES06576	Sorghum	plasma membrane	31.34	39.51
EES19575	Sorghum	plastid	34.28	37.63
KXG22062	Sorghum	plastid	6.42	37.11
KXG22060	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	27.97	36.98
KXG22064	Sorghum	plastid	32.75	35.75
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	22.63	34.61
EES10868	Sorghum	cytosol	24.16	30.62
KXG19708	Sorghum	cytosol	25.9	27.87

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	UniProt:C5XAF1	ncoils:Coil	EnsemblPlants:EER95927	ProteinID:EER95927	ProteinID:EER95927.2
GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244	GO:GO:0005249	GO:GO:0005267
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0034765	GO:GO:0042391	GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595
InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom
InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796
PFAM:PF13857	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490
PANTHER:PTHR10217	PANTHER:PTHR10217:SF526	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	EnsemblPlantsGene:SORBI_3002G049700
SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI00081AB8D4	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:4704009..4708117

Molecular Weight (calculated)

100655.0 Da

IEP (calculated)

8.082

GRAVY (calculated)

-0.141

Length

919 amino acids

Sequence
(BLAST)

001: MPLCRGGGGA AGGGSSSGGL AAGRTSNRYS TSIGALLPAR GGGWRPRLRL RRFIVSPYDP RYLAWEHSLV VLVAYCAWVA PFEFGFVPDP HGALAIADNA
101: VNAAFAVDIA LTFFVAYADG RTYLLQDDPR RIAWRYASTW LALDVASTVP IDVYRRILPP QASGYNFFGM LRLWRLHRVG TFFTRLEKNR KLSYFWVRCI
201: RLICVTLFAV HSAGCFYYLL ADRYHDADHT WLSSSMPDFK QESVWKRYAA SMYWSITTLT TVGYGDMHAV NTGEMVFTTL YMLFNLGLTA YLIGNMTNLV
301: VHGTSRTRKY RDAIKAATSF AVRHQLPARL QEQMVSHLSL KFRTDSEGLQ QQETLDALPK AIRSGISHHL FFALVQGVYL FQGVSNDLIF QLVSEMNAEY
401: FAPREDVILQ NEAPSDFYVL VTGSVELIEL QNGSEQLAGM ARAGDVVGEI GVLCYKPQLF TARTRTLCQL LRMERTAFLR IVQANVGDGT IIINNLIQYL
501: KEKRDSCAIA GVAEEIEYML ARGQLELPVT LCYAASKGDD FLMRQLLKRG VDPNESDNYW HTALHISASS GHDQCVKLLL EHGADPNATD AQGRVPLWEA
601: LSRRHRAAAR LLVDAGADLS AGDAALYARA AVEADDVALL EDVARHGGDV TVACWDDGVT ALHRAVLQGN VGMARVLLEH GADADREDGG GRTPRALADQ
701: LGHRDMQQLF IGSSSSSSHH REGAVESPKQ QQGSGTDHGG SRLAVVAAHQ PAVTRFKSAP APRVPVVPQH DSAGSSPSPS PSPPQSSRHS TPRRLVGFRN
801: SLFGVLSSSH LHWHDGGGGA GGGGGPSRHE RQTQSSRSRV RVTISCPEQG ASARKLVFMP ETMVQLVELA GSQFGFAPTR AVTMDGAQVD DARLVRDGDH
901: LLLVTHQWVP DTKVVQTNQ

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.