Factsheet for TraesCS6B01G081300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, vacuole
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G267900.1
TraesCS1B01G278600.1
TraesCS1D01G267800.1
TraesCS3A01G132400.1
TraesCS3A01G233800.1
TraesCS3A01G245200.1
TraesCS3A01G294200.1
TraesCS3A01G362200.1
TraesCS3B01G167100.1
TraesCS3B01G265500.1
TraesCS3B01G274500.1
TraesCS3B01G328800.1
TraesCS3B01G394600.3
TraesCS3D01G148600.1
TraesCS3D01G219600.1
TraesCS3D01G246300.1
TraesCS3D01G294000.1
TraesCS3D01G355900.1
TraesCS4A01G094300.1
TraesCS4B01G210100.1
TraesCS4D01G210900.1
TraesCS5A01G183600.1
TraesCS5B01G182000.1
TraesCS5D01G188600.1
TraesCS6A01G160500.1
TraesCS6B01G081300.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22200.1	TraesCS3A01G233800.1	AT2G26650.1	12678562
AT4G22200.1	TraesCS3B01G265500.1	AT2G26650.1	12678562
AT4G22200.1	TraesCS3D01G219600.1	AT2G26650.1	12678562
AT4G22200.1	TraesCS3A01G233800.1	AT2G26650.1	15299147
AT4G22200.1	TraesCS3B01G265500.1	AT2G26650.1	15299147
AT4G22200.1	TraesCS3D01G219600.1	AT2G26650.1	15299147
AT4G22200.1	TraesCS3A01G362200.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS3B01G394600.3	AT3G11410.1	11181729
AT4G22200.1	TraesCS3D01G355900.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS4A01G094300.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS4B01G210100.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS4D01G210900.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS5A01G183600.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS5B01G182000.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS5D01G188600.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS3A01G362200.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS3B01G394600.3	AT3G11410.1	12034902
AT4G22200.1	TraesCS3D01G355900.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS4A01G094300.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS4B01G210100.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS4D01G210900.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS5A01G183600.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS5B01G182000.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS5D01G188600.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS1A01G267900.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS1B01G278600.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS1D01G267800.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS6B01G081300.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS1A01G267900.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS1B01G278600.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS1D01G267800.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS6B01G081300.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS1A01G267900.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS1B01G278600.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS1D01G267800.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS6B01G081300.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS3A01G245200.1	AT4G32650.1	12678562
AT4G22200.1	TraesCS3B01G274500.1	AT4G32650.1	12678562
AT4G22200.1	TraesCS3D01G246300.1	AT4G32650.1	12678562
AT4G22200.1	TraesCS3A01G132400.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3A01G294200.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3B01G167100.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3B01G328800.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3D01G148600.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3D01G294000.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS6A01G160500.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS6B01G190900.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS6D01G152200.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS6D01G152200.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3A01G132400.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3A01G294200.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3B01G167100.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3B01G328800.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3D01G148600.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3D01G294000.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS6A01G160500.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS6B01G190900.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS6D01G152200.1	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G278600.1	Wheat	plasma membrane, plastid	84.69	81.85
HORVU1Hr1G065250.2	Barley	plastid	83.25	78.38
Os05t0428700-01	Rice	cytosol, plastid	48.33	71.38
KXG22060	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	58.25	70.07
Zm00001d010210_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	57.42	68.67
Zm00001d010209_P001	Maize	plastid	11.48	68.57
EES19575	Sorghum	plastid	66.87	66.79
KXG22062	Sorghum	plastid	12.68	66.67
KXG22064	Sorghum	plastid	65.91	65.44
GSMUA_Achr6P24240_001	Banana	cytosol	58.61	61.25
Zm00001d038252_P001	Maize	plastid	68.42	61.24
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	58.37	59.22
VIT_12s0034g02240.t01	Wine grape	cytosol, mitochondrion, plasma membrane	57.06	56.85
CDX79135	Canola	plasma membrane	53.47	56.73
KRH26375	Soybean	cytosol	55.38	55.72
AT4G22200.1	Thale cress	cytosol, plastid, vacuole	52.63	54.86
KRH44060	Soybean	cytosol	54.55	54.68
PGSC0003DMT400061090	Potato	cytosol	52.99	53.76
Solyc01g104030.2.1	Tomato	cytosol	53.71	53.64
Bra013599.1-P	Field mustard	cytosol	53.47	51.86
CDX82921	Canola	cytosol	53.35	51.74
PGSC0003DMT400062100	Potato	plasma membrane	52.03	51.66
Solyc10g024360.1.1	Tomato	cytosol	50.96	50.65
TraesCS3B01G328800.1	Wheat	plasma membrane	28.35	46.93
TraesCS6B01G190900.1	Wheat	plasma membrane	33.37	38.48
TraesCS3B01G167100.1	Wheat	plasma membrane	32.3	37.55
TraesCS3B01G265500.1	Wheat	plasma membrane	38.52	35.9
TraesCS2B01G329800.1	Wheat	plasma membrane	26.55	30.71
TraesCS3B01G274500.1	Wheat	plastid	22.73	29.37
TraesCS7B01G106900.1	Wheat	cytosol, plasma membrane, vacuole	28.47	28.5
TraesCS7B01G106600.1	Wheat	cytosol	24.16	27.52
TraesCS7B01G106800.1	Wheat	cytosol	19.14	27.21

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085
InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770
InterPro:Ion_trans_dom	InterPro:KHA_dom	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796
PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF493
InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G081300	EnsemblPlants:TraesCS6B01G081300.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	TIGR:cd00038
TIGR:cd00204	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:57710368..57713604

Molecular Weight (calculated)

93904.3 Da

IEP (calculated)

8.326

GRAVY (calculated)

-0.143

Length

836 amino acids

Sequence
(BLAST)

001: MTTNRTRTSS WTGAMSSGRG RGSGSGSGAS RSFHAQNLSK LMLPPLGSSL SQFTSGDKWV VSPLESRYRW WETFMVILTA YSAWVYPFEV AFMDGSPKRG
101: LEVADMVVDI FFTVDIVLTF FVAYIDSRTQ LLVRDRRRIA FRYLSTFFIM DVASTIPFQG LSYLVHGKAR EGLLYSLLVL LRLWRLRKFQ LFFPRLEKDI
201: RFSYFWIRCA RLIAVTLFLV HGAGCLYYLL ADRYPDRDKT WIGAATPNFR QESLWIRYIT TMSTVGQGDL HAQNKLEMMF NIFYMLFNLG LAAYLSGNMT
301: NLALQGTRRT MEFRNSICAA SDFVCRNRLP PRLQQQILAY MCLKFRAESL NQQQLMDQLP KSICQSICEH LFLPVVKEVY LFKGISRDAQ LLLVTQTKPE
401: YIPPKEDVIV QNEAADGVYI IVSGEVEIIY FNGEREEVVG KLGTMDILGE VSALSDRPQT FTFRTRTLSQ LLRLKQATLR EVMESKPDDR ALIFRNLLKH
501: QIEVHDMKDL LGESESTGAG GSGNIVPCNL LTVAATGNAG FLEDLLKVGM DPDVGDSKGR TALHIAASKG YEDCVQALLS HGCNVNIKDA QGNTALWQAI
601: AARHHKVFSS LYHVARDSNR RAGGDLLCHA TRRGDLDTLR ELLKHGLDVD SEDNDGSTAL RVALSEGQAD LARFLVMNGA SLDDDGYTQR QTTVPVAKLR
701: ELVERREVGH PITVYDSPRA DTVTVVGSSS EELRRGRFPG TTSKKPDSAH WPRVSIYKGH PLVRNHSSEA GKLINLPATT TMEELKTIIG EKLKVGAEKA
801: LVMNDEGLEI DSVDVIRDKD KLFIVTEEHM RMLASI

Best Arabidopsis Sequence Match ( AT2G25600.1 )
(BLAST)

001: MEKKKVWFWG VKDDGEGGGG RGGGRTKDAE DDVADHLSRD GTMSQYSLSK GLLPSLGANN RSSRDVILPR FIVSPFDPRY RAWETFLVFL VLYTAWASPF
101: EFGFLQKPRP PLSILDNIVN GFFAVDIVLT FFVAFLDKVT YLLVDDPKRI AWRYASTWLI FDVVSTFPYE IFGSLLHESI QGYGIFSMLR LWRLRRVSNC
201: FARLEKDRKY SYFWVRCSKL LLVTLFVIHC GACFLYSIAA HYPDPSKTFM ALTDENWKES PIAVRYNTAM YWSITTFSTT GYGDIHGVNS REMTFILFYM
301: VFNLGLSAYI IGNMTNLVVH VTGRTRKFRD TIQAASGFGQ RNNLPVRLQD QMVAHLCLRY RTDSEGLQQQ EIIDSLPKAI RSSISHYLFY EVVDKIYLFH
401: GISNDLLFQL VTEMKAEYFP PKEDVILQNE APTDFYILVT GAVDIIARVN GVEQVVSEAQ RGHVFGEVGV LCYRPQLFTV RTKRLSQLLR LNRTVLLNLV
501: QANVGDGAII MNNLLQHLKD SEDPVMKGVL ADTEHMLAQG KMDLPLSLCF AAARGDDLLL HQLLRRGSSP NEMDKDGRTA LHIAASKGSH YCVVLLLEHG
601: ADPNIRDSEG NVPLWEAIIG RHREIAKLLA ENGAKLSLDS VSYFSGLAVE KNCLDALKDI IKYGGDVTLP DGNGTTALHR AVSEGHLEIV KFLLDQGADL
701: DWPDSYGWTP RGLADHQGNE EIKTLFHNHR PVEKKPKPIP GIPQSPVTGK PLMKYSSEPT MHSGELVLDG GQVVVSQKRK LNNFRNSLFG IISAANSADD
801: GGEVPRSPAV PGGGGSMIYP ERVTISSPEN GETGGKVVLL PNSMEELLKI GENKMGFVPT KVLTREGAEI DDITLIRDGD FLLLSRDP

Arabidopsis Description

AKT6Potassium channel AKT6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.