Factsheet for TraesCS7B01G106800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P22950_001	Banana	cytosol	66.5	72.27
TraesCS7A01G200100.1	Wheat	cytosol	97.45	68.87
TraesCS7D01G203100.1	Wheat	cytosol	95.92	68.03
TraesCS7B01G106900.1	Wheat	cytosol, plasma membrane, vacuole	82.48	58.08
HORVU7Hr1G040970.5	Barley	cytosol	94.22	58.07
TraesCS7B01G106600.1	Wheat	cytosol	70.41	56.4
KXG19708	Sorghum	cytosol	79.42	54.68
Os06t0250600-01	Rice	cytosol	79.59	54.55
Zm00001d037289_P002	Maize	cytosol	79.42	53.55
Zm00001d044717_P001	Maize	cytosol	78.4	52.45
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	59.52	47.88
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	67.69	47.1
Solyc03g097940.2.1	Tomato	plasma membrane	56.97	43.11
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	58.33	41.03
TraesCS2B01G329800.1	Wheat	plasma membrane	48.81	39.7
KRH60563	Soybean	mitochondrion, plasma membrane	51.02	38.51
TraesCS3B01G265500.1	Wheat	plasma membrane	31.12	20.4
TraesCS3B01G328800.1	Wheat	plasma membrane	16.67	19.41
TraesCS6B01G081300.1	Wheat	plastid	27.21	19.14
TraesCS1B01G278600.1	Wheat	plasma membrane, plastid	27.72	18.84
TraesCS3B01G167100.1	Wheat	plasma membrane	21.26	17.39
TraesCS6B01G190900.1	Wheat	plasma membrane	21.26	17.24
TraesCS3B01G274500.1	Wheat	plastid	18.03	16.38

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000595
InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:KHA_dom
InterPro:K_chnl_dom	PFAM:PF00027	PFAM:PF07885	PFAM:PF11834	PFAM:PF12796	PFAM:PF13857
PRINTS:PR01415	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217
PANTHER:PTHR10217:SF478	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206
SUPFAM:SSF81324	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7B01G106800	EnsemblPlants:TraesCS7B01G106800.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom
TIGR:cd00038	TIGR:cd00204	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:-:123658595..123664586

Molecular Weight (calculated)

66148.4 Da

IEP (calculated)

5.516

GRAVY (calculated)

-0.224

Length

588 amino acids

Sequence
(BLAST)

001: MEGYTWIGSL QLGDYSYSHF REIDLATRYV ISMYFAVVTM TTVGYGDIHA VNVREMIFVM IYVSFDMVLG AYLIGNMTAM IVKGSATERF RDKMKEVIRY
101: MNRNRLGKDI REQIKGHLRL QYESSCTEAS VLRDIPVSIR AKISQTLYMP YIEKTPLFKG CSEEFLQQIV IRLQEEFFLP EEVILEQGSA VDQLYFVCQG
201: ALEGAAVGED GQETILMLEQ GNSFGEIAIL CNIPQPYTVR VCELCRLLRL DKESFAHILE IYFTDGRKLL SNLTESNEYG KRVKHIESDI TFHIGKQEEE
301: LTLRVNNAAF YGDLHQLTGL IRAGANPKNS DYDGRSPLHL AASRGYEDVV QFLIHQGADI NLTDKFGNTP LLEAVRQGHD RVATLLFSKG AKLNLENAGS
401: HLCIAVSKGD SDFIRGALAY GVDPNSKDYD HRNPLHIAAA EGLYIMAKLL VEAGASVLAT DRRGTTPLDE GHKSGSKPFI MLLEQAKADE LSKFPTQGEE
501: VRDKMHTRRC SVFPYYPWDT DAKRKEGVML WIPHTINELI RSAQEKLGLS SSCLRLLCQD GMTVQDVDMV NDGQKLYLVG DKDTGDSE

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.