Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G132400.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G294000.1
TraesCS6A01G160500.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G41160.1 TraesCS3A01G132400.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3A01G294200.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3B01G167100.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3B01G328800.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3D01G148600.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3D01G294000.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS6A01G160500.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS6B01G190900.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS6D01G152200.1 AT5G46240.1 15299147
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G289900.1 Wheat peroxisome 98.21 98.46
TraesCS6A01G262900.1 Wheat plasma membrane 98.21 98.21
HORVU6Hr1G066740.2 Barley golgi, mitochondrion 88.72 82.78
Os02t0689200-03 Rice plasma membrane 80.26 81.3
Zm00001d051504_P001 Maize golgi, peroxisome, plasma membrane 79.23 80.47
GSMUA_Achr5P12690_001 Banana plasma membrane 57.95 64.76
EES05697 Sorghum plastid 79.49 61.88
TraesCS2D01G452400.1 Wheat peroxisome 59.23 61.76
KRH00977 Soybean endoplasmic reticulum, plasma membrane, vacuole 54.36 58.08
KRH40250 Soybean endoplasmic reticulum, plasma membrane, vacuole 53.85 58.01
CDY12545 Canola plasma membrane 43.33 56.71
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 42.56 55.52
PGSC0003DMT400004320 Potato plasma membrane 52.31 55.28
Solyc01g088550.2.1 Tomato plasma membrane 51.54 55.22
VIT_15s0021g00650.t01 Wine grape plastid 52.82 54.21
AT1G44750.1 Thale cress plasma membrane 52.56 54.09
VIT_19s0014g00150.t01 Wine grape plasma membrane 50.26 51.72
Bra037874.1-P Field mustard plasma membrane 43.59 50.9
TraesCS2D01G452200.1 Wheat plasma membrane 48.21 49.34
KRH13483 Soybean plasma membrane 38.72 49.19
AT4G08700.1 Thale cress plasma membrane 45.38 49.03
TraesCS2D01G452300.1 Wheat peroxisome 47.44 48.3
CDY14989 Canola plasma membrane 51.28 48.19
Bra036955.1-P Field mustard plasma membrane 51.03 47.95
CDX71327 Canola plasma membrane 51.03 47.84
AT5G41160.1 Thale cress plasma membrane 44.62 47.8
CDY54350 Canola plasma membrane 39.49 46.39
TraesCS2D01G452100.1 Wheat plasma membrane 44.87 44.64
CDX75141 Canola plasma membrane 37.95 44.58
KRH21843 Soybean mitochondrion 46.67 43.33
TraesCS5D01G254300.1 Wheat cytosol, peroxisome, plasma membrane 29.23 31.67
TraesCS5D01G254100.1 Wheat plasma membrane 28.21 29.18
TraesCS5D01G254200.2 Wheat plasma membrane 28.46 27.07
TraesCS4D01G302200.1 Wheat plastid 26.92 27.06
TraesCS5D01G437200.1 Wheat plasma membrane 25.9 26.17
TraesCS3D01G267700.1 Wheat plastid 25.38 25.85
TraesCS4D01G302100.1 Wheat plastid 25.64 25.77
TraesCS4D01G302000.1 Wheat plastid 25.64 25.38
TraesCS5D01G367700.1 Wheat cytosol, endoplasmic reticulum, peroxisome 25.9 24.11
TraesCS1D01G393900.1 Wheat plastid 23.33 23.1
TraesCS1D01G394000.1 Wheat plastid 22.31 22.96
TraesCS1D01G394100.1 Wheat plastid 22.82 22.03
Protein Annotations
EnsemblPlants:TraesCS6D01G243400.1EnsemblPlantsGene:TraesCS6D01G243400GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376PANTHER:PTHR31376:SF31
PFAM:PF16913SEG:segTMHMM:TMhelixMapMan:24.2.1.6::
Description
No Description!
Coordinates
chr6D:+:345389529..345391090
Molecular Weight (calculated)
42347.4 Da
IEP (calculated)
6.018
GRAVY (calculated)
0.488
Length
390 amino acids
Sequence
(BLAST)
001: MAGYDGNGNS NAVRGGGGGS NQEEVQIEIA GSSKPAVSLA HEAPQQSAPV KHWQWWLMVV LNMFFLVAGQ TSATLLGRFY YNEGGNSKWL STFVQTAGFP
101: VLFIAQFLFR PKSPSTQATT SGPEASITKI TLIYIALGLI IAADDLMYSY GLLYLPVSTY SLICASQLAF NAVLSYFLNA QKFTPLIFNS VLLLTFSASL
201: LGVDEDSPSS SDISQGNHVL GFVLTLGASA TYSLILSLMQ VTFEKVIKRE TFSVVLNMQI YTAFVATLAS LVGLFASGEW KTLEGEMHMF SPGKVSYVMT
301: VLWTAISWQI ASVGVVGLIF VVSSLFSNVI STLALPIIPV FAVIFFHDKM DGIKIIAMLI AIWGFISYGY QLYVDDKKSR KTSSSVEENS
Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.