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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035469.1-P Field mustard plasma membrane 80.9 82.14
CDY53149 Canola plasma membrane 80.65 81.68
AT1G57990.1 Thale cress plasma membrane 78.14 79.74
AT1G57980.1 Thale cress plasma membrane 78.39 79.19
CDY31805 Canola plasma membrane 81.16 72.91
AT1G09860.1 Thale cress plasma membrane 63.57 66.06
AT1G47603.1 Thale cress plasma membrane 39.7 40.2
AT1G19770.1 Thale cress plasma membrane 32.16 32.57
AT4G08700.1 Thale cress plasma membrane 25.63 28.25
AT1G44750.1 Thale cress plasma membrane 26.88 28.23
AT1G75470.1 Thale cress plasma membrane 27.39 28.17
AT5G41160.1 Thale cress plasma membrane 25.13 27.47
AT4G18190.1 Thale cress plasma membrane 26.38 27.13
AT4G18205.1 Thale cress plasma membrane 23.87 25.2
AT4G18197.1 Thale cress plasma membrane 24.37 24.87
AT4G18220.1 Thale cress plasma membrane 24.12 24.62
AT4G18195.1 Thale cress plasma membrane 23.87 24.11
AT4G18210.1 Thale cress plasma membrane 23.37 23.85
Os04t0587500-01 Rice cytosol, peroxisome 22.61 23.81
Os04t0587400-01 Rice plasma membrane 24.37 23.77
AT1G28230.1 Thale cress plasma membrane 19.85 22.19
AT2G33750.1 Thale cress plasma membrane 19.35 21.51
AT1G28220.1 Thale cress plasma membrane 18.34 20.8
AT1G30840.1 Thale cress peroxisome, plasma membrane, vacuole 18.84 19.63
AT2G24220.2 Thale cress plasma membrane 17.59 18.47
Os04t0587300-01 Rice peroxisome 0.0 0.0
Protein Annotations
MapMan:24.2.1.6EntrezGene:842164ProteinID:AAG50664.1ProteinID:AEE33479.1ProteinID:AEE33480.1ArrayExpress:AT1G57943
EnsemblPlantsGene:AT1G57943RefSeq:AT1G57943TAIR:AT1G57943RefSeq:AT1G57943-TAIR-GEnsemblPlants:AT1G57943.1TAIR:AT1G57943.1
Symbol:ATPUP17Unigene:At.62379EMBL:DQ056499EMBL:DQ446369GO:GO:0003674GO:GO:0005215
GO:GO:0005345GO:GO:0005575GO:GO:0006810GO:GO:0006863GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:1904823RefSeq:NP_001077737.1RefSeq:NP_176098.1PFAM:PF16913PO:PO:0000293
PANTHER:PTHR31376PANTHER:PTHR31376:SF34InterPro:PUP_plantUniProt:Q1PFJ4TMHMM:TMhelixUniParc:UPI00000AA763
SEG:seg:::::
Description
PUP17Probable purine permease 17 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFJ4]
Coordinates
chr1:-:21437602..21438941
Molecular Weight (calculated)
45395.9 Da
IEP (calculated)
8.836
GRAVY (calculated)
0.320
Length
398 amino acids
Sequence
(BLAST)
001: MEMSKASKQT TRHEESEHVQ NPEPDQILSP RRSLELKQRK WWISVSLCLF LVLLGDSLVM LLLNFFYVQM KQDRREEYDQ DLQYKGTWTQ ALIQNAAFPI
101: LIPLFFIFPK PKQHLETNNT SFLSLRLFFL YLSLGVLVAA HSKLFALGKL VSNYGIFSLI STTQLIFTAV LTAIINRFKF TRWIIISILL TIVIYVLGTP
201: DFGGQPHDGE EFGYNIQAWL AFSATIAFSL SLCLIQLGFE KLQVKTKRYG NEKVFRMVLE MQICVAFVAS VVCLVGLFAS DEYKELKGDS KRFKKGETYY
301: VLSLVGLALS WQVWAVGMIG LVHYVSGLFG DVVHMCASPF VALFVVLAFD FMDDVFSWPR IGALIGTVLA LGSYFYTLHK RNKKKMAELN QSENNVEV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.