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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94937 Canola plasma membrane 80.42 81.27
Bra019981.1-P Field mustard plasma membrane 81.72 80.67
CDY22619 Canola plasma membrane 79.37 80.64
CDX93469 Canola plasma membrane 80.94 80.31
AT1G57990.1 Thale cress plasma membrane 64.75 63.59
AT1G57943.1 Thale cress plasma membrane 66.06 63.57
AT1G57980.1 Thale cress plasma membrane 65.01 63.2
AT1G47603.1 Thale cress plasma membrane 42.04 40.97
AT1G19770.1 Thale cress plasma membrane 33.68 32.82
AT4G08700.1 Thale cress plasma membrane 26.37 27.98
AT1G44750.1 Thale cress plasma membrane 27.42 27.7
AT5G41160.1 Thale cress plasma membrane 25.59 26.92
AT1G75470.1 Thale cress plasma membrane 27.15 26.87
AT4G18190.1 Thale cress plasma membrane 25.59 25.32
AT4G18205.1 Thale cress plasma membrane 23.76 24.14
AT4G18220.1 Thale cress plasma membrane 24.54 24.1
AT4G18210.1 Thale cress plasma membrane 24.02 23.59
AT4G18195.1 Thale cress plasma membrane 23.76 23.1
Os04t0587500-01 Rice cytosol, peroxisome 22.45 22.75
AT4G18197.1 Thale cress plasma membrane 22.72 22.31
Os04t0587400-01 Rice plasma membrane 22.98 21.57
AT2G33750.1 Thale cress plasma membrane 19.58 20.95
AT1G28230.1 Thale cress plasma membrane 18.8 20.22
AT1G30840.1 Thale cress peroxisome, plasma membrane, vacuole 19.32 19.37
AT1G28220.1 Thale cress plasma membrane 17.49 19.09
AT2G24220.2 Thale cress plasma membrane 18.02 18.21
Os04t0587300-01 Rice peroxisome 0.0 0.0
Protein Annotations
MapMan:24.2.1.6EntrezGene:837518ProteinID:AAB60739.1ProteinID:AEE28508.1ArrayExpress:AT1G09860EnsemblPlantsGene:AT1G09860
RefSeq:AT1G09860TAIR:AT1G09860RefSeq:AT1G09860-TAIR-GEnsemblPlants:AT1G09860.1TAIR:AT1G09860.1Symbol:ATPUP16
Unigene:At.66949EMBL:BX815869ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005345
GO:GO:0005575GO:GO:0006810GO:GO:0006863GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:1904823RefSeq:NP_172457.1UniProt:O04508PFAM:PF16913PANTHER:PTHR31376PANTHER:PTHR31376:SF34
InterPro:PUP_plantTMHMM:TMhelixUniParc:UPI00000AB608SEG:seg::
Description
PUP16Probable purine permease 16 [Source:UniProtKB/Swiss-Prot;Acc:O04508]
Coordinates
chr1:-:3204016..3205411
Molecular Weight (calculated)
43227.0 Da
IEP (calculated)
8.786
GRAVY (calculated)
0.321
Length
383 amino acids
Sequence
(BLAST)
001: MEEFQGPEPR GQMMSENPRS LELNQRKWWI SVFICGFLIF AGDSLVMLLL NFFYVQDNRS ESDQDRQYKG TWTQALIQNA AFPILIPFFF ILSSPKPNPE
101: TVSNQTNNGW FRVLSLYVSL GVLVSVYSKL YALGKLYVGW GILLSTQLIL TSLFSAFINR LKFNRWIIIS IIFTLGADFF GGPAFAGTPN EDETDPYDIK
201: AWLILIFPTL AFSLSLCLMQ LGFDKVLVKT KRYGNKKVFR MVLEMQICVS FIATLICTVG LFASGEFKEL KGDSERFKKG KTYYILSLVG LALSWQVWAV
301: GLLGLVLLVS GLFADVVHMG ASPVVALLVV LAFDFMDDEF GWQRRGALLG AVLALASYFY SLHTKKKKEI AELNKRENNN SEA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.