Factsheet for Bra013290.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, plasma membrane

Predictor Summary:

plastid 1
nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78833	Canola	cytosol, extracellular, plasma membrane	98.33	97.71
AT4G18190.1	Thale cress	plasma membrane	66.32	81.91
Bra040924.1-P	Field mustard	plasma membrane	39.54	48.34
Bra013291.1-P	Field mustard	plasma membrane	36.19	46.76
Bra013292.1-P	Field mustard	plasma membrane	38.08	46.67
Bra021018.1-P	Field mustard	plasma membrane	38.49	46.23
Bra040925.1-P	Field mustard	plasma membrane	36.61	44.87
Bra037874.1-P	Field mustard	plasma membrane	30.75	44.01
Bra036955.1-P	Field mustard	plasma membrane	35.15	40.48
Bra010890.1-P	Field mustard	plasma membrane	23.43	31.82
Bra010891.1-P	Field mustard	plasma membrane	23.22	31.18
Bra005474.1-P	Field mustard	extracellular, plasma membrane	22.8	31.05
Bra036866.1-P	Field mustard	plasma membrane	23.64	30.05
Bra030078.1-P	Field mustard	extracellular, plasma membrane	21.55	29.51
Bra032232.1-P	Field mustard	plasma membrane	22.59	27.62
Bra035469.1-P	Field mustard	plasma membrane	21.76	26.53
Bra025764.1-P	Field mustard	plasma membrane	21.13	26.51
Bra025766.1-P	Field mustard	plasma membrane	19.04	26.45
Bra019981.1-P	Field mustard	plasma membrane	21.34	26.29
Bra023144.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	20.71	25.32
Bra023141.1-P	Field mustard	plasma membrane	20.71	25.32
Bra016495.1-P	Field mustard	plasma membrane	21.55	16.59
Bra039238.1-P	Field mustard	plastid	19.25	12.6

Protein Annotations

Gene3D:2.160.20.10	MapMan:24.2.1.6	EnsemblPlantsGene:Bra013290	EnsemblPlants:Bra013290.1	EnsemblPlants:Bra013290.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	InterPro:IPR012334	UniProt:M4D9Y0	PFAM:PF16913	PANTHER:PTHR31376	PANTHER:PTHR31376:SF17
InterPro:PUP_plant	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SUPFAM:SSF103481	SUPFAM:SSF51126	TMHMM:TMhelix
UniParc:UPI0002545EB9	SEG:seg	:	:	:	:

Description

AT4G18190 (E=6e-146) ATPUP6 | ATPUP6; purine transmembrane transporter

Coordinates

chrA01:+:4769397..4771685

Molecular Weight (calculated)

52915.7 Da

IEP (calculated)

6.244

GRAVY (calculated)

0.190

Length

478 amino acids

Sequence
(BLAST)

001: MSSVNSKFFH IALVECRDFK GTRLNITGAS DSPNSDGTHI VSIGQGNFQI TIASIKCGPG HGISFLLSVA SKVKLSEIYF KNIRGTSSSR VAMEVESETQ
101: ELHIHVNGEP ERKSSTEQRS HNYSWRLRVS LYVILLLAGE TIATLLGRLY YDKGGNSIWL ETLVQLVGFP LTLPCYYYIK HDSSSKTNNL TNKTTTSFLT
201: LPLVYIGLGL LAAGHSVLYS FGLLYLPVST FSLISASQLA FNAVFSYFLN SQKFTPCILN SLVLLTTSST LLVIQPEPES STSNSSSKYN YVIGYICAIG
301: SSAGYSLVLS LTDYAFEKIL KKYTFKAILD MVTYQSLVAT CAVVVGLFVS GGWKMLRTEM EEFRLGKNSY ILINIGAVIS WQACWIGSVG LILEVSSLFS
401: NVISTLCLPV VPVLAVVFFR DEMSGIKLIA MFLAIWGFVS YAYQHYVDDP KQEEEQEIPQ GEEEEKETQE EKSNNIQD

Best Arabidopsis Sequence Match ( AT4G18190.1 )
(BLAST)

001: MMELESETQE LHLHVNGEPE GKFSTEERSH KYSWRLRVSL YVTLLLAGET IATLLGRLYY EKGGKSTWLE TLVQLVGFPL TLPCYYYLKP EPSKTKTITK
101: KTTSSFLTLS LVYIGLGLLV AGHCILYSFG LLYLPVSTFS LISASQLAFN AVFSYFLNSQ KITPFILNSL VLLTISSTLL VIQHEPESPS STSKSAAKSK
201: YVIGYICAVG SSAGYSLVLS LTDYAFEKIL KKYTFKAILD MATYPSMVAT CVVVVGLFGS GGWKKLSTEM EEFQLGKSSY ILINIGSTIS WQACLIGSVG
301: LIIEVSSLFS NVISTLCLPV VPVLAVVFFR DEMSGIKLVA MFLAIWGFVS YGYQHYVNDR KPEEDQELPQ SKEEEEQKQV DTIHVQA

Arabidopsis Description

PUP6Probable purine permease 6 [Source:UniProtKB/Swiss-Prot;Acc:O49722]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.