Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0037g00420.t01 | Wine grape | extracellular | 34.23 | 52.78 |
| AT4G28088.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 33.33 | 48.05 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 28.83 | 47.76 |
| Bra026283.1-P | Field mustard | endoplasmic reticulum, extracellular | 32.43 | 46.75 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 29.73 | 46.48 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 29.73 | 46.48 |
| Bra032129.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 30.63 | 45.33 |
| CDY20271 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.63 | 45.33 |
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.63 | 45.33 |
| AT2G24040.1 | Thale cress | plasma membrane | 30.63 | 45.33 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 28.83 | 45.07 |
| KRH57776 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 21.62 | 44.44 |
| TraesCS7A01G149300.1 | Wheat | extracellular, golgi, plasma membrane | 29.73 | 43.42 |
| KRH04745 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 20.72 | 42.59 |
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 28.83 | 42.11 |
| Os06t0184800-01 | Rice | plasma membrane | 27.93 | 40.79 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 26.13 | 38.67 |
| KRH33736 | Soybean | endoplasmic reticulum, plasma membrane | 19.82 | 38.6 |
| KRG90444 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 19.82 | 38.6 |
| EER89340 | Sorghum | extracellular, golgi | 26.13 | 38.16 |
| GSMUA_Achr7P16140_001 | Banana | endoplasmic reticulum, extracellular, golgi | 22.52 | 36.23 |
| TraesCS7B01G053000.1 | Wheat | cytosol, nucleus, plasma membrane | 29.73 | 17.28 |
Protein Annotations
| EMBL:ACUP02001201 | EnsemblPlants:KRH72320 | EnsemblPlantsGene:GLYMA_02G205100 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PMP3 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF34 | PFAM:PF01679 | ProteinID:KRH72320 | ProteinID:KRH72320.1 |
| TMHMM:TMhelix | UniParc:UPI0006EE05F1 | UniProt:A0A0R0KZA4 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr2:+:39029669..39030440
Molecular Weight (calculated)
12792.9 Da
IEP (calculated)
6.078
GRAVY (calculated)
0.301
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVKTQHLLR EYKKETQTRY IILVTEGNRE LHVGCLISII EQAEERNAVW KMPTRCEICC EIMIAILIPP LGVCFRHGCC SVEFIICLLL TILGVLSMHN
101: TDDNFSLYAY E
101: TDDNFSLYAY E
1: MPSNCEILCE IIIAILLPPL GVCFRKGCCT VEFLICLVLT ILGYVPGIIY AIYVIVFQHR EEYFDEYRRP IYSA
Arabidopsis Description
UPF0057 membrane protein At4g30660 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUI0]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.