Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 93.33 | 93.33 |
| CDY20271 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 93.33 | 93.33 |
| Bra032129.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 93.33 | 93.33 |
| AT4G30660.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 74.67 | 75.68 |
| AT4G28088.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 72.0 | 70.13 |
| VIT_11s0037g00420.t01 | Wine grape | extracellular | 65.33 | 68.06 |
| AT2G38905.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 48.0 | 66.67 |
| AT3G05880.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 46.67 | 64.81 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 60.0 | 63.38 |
| AT4G30650.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 60.0 | 61.64 |
| AT3G05890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 44.0 | 61.11 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 57.33 | 60.56 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 56.0 | 59.15 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 50.67 | 56.72 |
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 56.0 | 55.26 |
| TraesCS7A01G149300.1 | Wheat | extracellular, golgi, plasma membrane | 56.0 | 55.26 |
| Os06t0184800-01 | Rice | plasma membrane | 56.0 | 55.26 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 49.33 | 49.33 |
| EER89340 | Sorghum | extracellular, golgi | 49.33 | 48.68 |
| AT1G57550.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 33.33 | 48.08 |
| GSMUA_Achr7P16140_001 | Banana | endoplasmic reticulum, extracellular, golgi | 44.0 | 47.83 |
| KRH72320 | Soybean | plasma membrane | 45.33 | 30.63 |
| TraesCS7B01G053000.1 | Wheat | cytosol, nucleus, plasma membrane | 56.0 | 21.99 |
Protein Annotations
| MapMan:35.1 | EntrezGene:816938 | EntrezGene:829189 | UniProt:A0A178VW91 | ProteinID:AAC63672.1 | ProteinID:ACI22364.1 |
| ProteinID:AEC07522.1 | ProteinID:AEE85791.1 | ProteinID:AEE85792.1 | ArrayExpress:AT2G24040 | EnsemblPlantsGene:AT2G24040 | RefSeq:AT2G24040 |
| TAIR:AT2G24040 | RefSeq:AT2G24040-TAIR-G | EnsemblPlants:AT2G24040.1 | TAIR:AT2G24040.1 | UniProt:B6DVK0 | EMBL:BT012202 |
| EMBL:BT012367 | EMBL:BT029529 | ProteinID:CAB52439.1 | ProteinID:CAB79784.1 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_001154278.1 | RefSeq:NP_179982.1 | RefSeq:NP_194795.1 | UniProt:O82232 | ProteinID:OAO98447.1 |
| ProteinID:OAP09122.1 | PFAM:PF01679 | InterPro:PMP3 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01309 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF34 |
| TMHMM:TMhelix | UniParc:UPI0000133434 | : | : | : | : |
Description
Putative low temperature and salt responsive protein [Source:UniProtKB/TrEMBL;Acc:B6DVK0]
Coordinates
chr2:+:10223857..10225171
Molecular Weight (calculated)
8625.8 Da
IEP (calculated)
4.833
GRAVY (calculated)
0.992
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MASSCELCCE IFIAILLPPV GVCLRHGCCT VEFFICLILT CLGYLPGIIY AIYAICFLHR DEYFDEYRRP IYYVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.