Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 4
- extracellular 4
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G05880.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 77.78 | 77.78 |
| Solyc01g102290.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 77.78 | 75.0 |
| PGSC0003DMT400046962 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 72.22 | 69.64 |
| AT2G38905.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 64.81 | 64.81 |
| OQU92539 | Sorghum | extracellular | 70.37 | 62.3 |
| Zm00001d047419_P001 | Maize | extracellular, golgi, vacuole | 62.96 | 56.67 |
| Os03t0370600-00 | Rice | golgi, plasma membrane, vacuole | 66.67 | 56.25 |
| AT1G57550.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 51.85 | 53.85 |
| AT4G30650.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 62.96 | 46.58 |
| PGSC0003DMT400046963 | Potato | endoplasmic reticulum, plasma membrane | 61.11 | 45.83 |
| AT2G24040.1 | Thale cress | plasma membrane | 61.11 | 44.0 |
| AT4G30660.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 57.41 | 41.89 |
| AT4G28088.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 59.26 | 41.56 |
| TraesCS2A01G582800.1 | Wheat | plasma membrane | 61.11 | 30.84 |
| TraesCS2D01G597300.1 | Wheat | plasma membrane | 61.11 | 27.73 |
| TraesCS2B01G603700.1 | Wheat | plasma membrane | 64.81 | 26.32 |
Protein Annotations
| MapMan:35.2 | EntrezGene:819758 | UniProt:A0A178VG66 | ProteinID:AAC97511.1 | ProteinID:AAF23227.1 | ProteinID:AAF26091.1 |
| ProteinID:AAK50618.1 | ProteinID:AEE74312.1 | EMBL:AF122006 | EMBL:AK176253 | EMBL:AK228716 | ArrayExpress:AT3G05890 |
| EnsemblPlantsGene:AT3G05890 | RefSeq:AT3G05890 | TAIR:AT3G05890 | RefSeq:AT3G05890-TAIR-G | EnsemblPlants:AT3G05890.1 | TAIR:AT3G05890.1 |
| EMBL:AY084701 | EMBL:BT026006 | GO:GO:0005575 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009409 |
| GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_187240.1 | ProteinID:OAP04511.1 | PFAM:PF01679 | InterPro:PMP3 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01309 |
| PANTHER:PTHR21659 | PANTHER:PTHR21659:SF58 | UniProt:Q67Z65 | UniProt:Q9ZNS6 | Symbol:RCI2B | TMHMM:TMhelix |
| UniParc:UPI00000013E3 | : | : | : | : | : |
Description
RCI2BRCI2B [Source:UniProtKB/TrEMBL;Acc:A0A178VG66]
Coordinates
chr3:-:1757440..1758807
Molecular Weight (calculated)
6081.9 Da
IEP (calculated)
8.202
GRAVY (calculated)
1.554
Length
54 amino acids
Sequence
(BLAST)
(BLAST)
1: MSTATFVEII LAIILPPLGV FLKFGCKVEF WICLILTLFG YLPGILYALY IITK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.