Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- endoplasmic reticulum 5
- plasma membrane 4
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0019g03650.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 96.3 | 96.3 |
| Bra000104.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 96.3 | 96.3 |
| CDY07689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 96.3 | 96.3 |
| CDY14420 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 96.3 | 96.3 |
| Solyc04g049960.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 94.44 | 94.44 |
| KRH57776 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 94.44 | 94.44 |
| Bra017095.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 94.44 | 94.44 |
| CDX93294 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 94.44 | 94.44 |
| CDY18362 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 94.44 | 94.44 |
| EES18938 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 92.59 | 92.59 |
| Zm00001d035505_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 90.74 | 90.74 |
| KRH04745 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 90.74 | 90.74 |
| GSMUA_Achr7P15490_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 90.74 | 90.74 |
| TraesCS1A01G062000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 88.89 | 88.89 |
| TraesCS1B01G080300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 88.89 | 88.89 |
| TraesCS1D01G062900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 88.89 | 88.89 |
| Os05t0122700-01 | Rice | endoplasmic reticulum, plasma membrane | 85.19 | 85.19 |
| TraesCS4A01G107100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 85.19 | 85.19 |
| TraesCS4B01G197300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 85.19 | 85.19 |
| TraesCS4D01G197700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 85.19 | 85.19 |
| TraesCS4D01G197800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 81.48 | 81.48 |
| HORVU4Hr1G057020.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 81.48 | 81.48 |
| TraesCS4A01G107000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 81.48 | 81.48 |
| AT3G05880.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 77.78 | 77.78 |
| AT1G57550.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 64.81 | 67.31 |
| AT3G05890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 64.81 | 64.81 |
| AT4G30650.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 70.37 | 52.05 |
| HORVU4Hr1G057000.1 | Barley | plasma membrane | 85.19 | 51.69 |
| AT4G30660.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 70.37 | 51.35 |
| AT2G24040.1 | Thale cress | plasma membrane | 66.67 | 48.0 |
| AT4G28088.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 62.96 | 44.16 |
Protein Annotations
| MapMan:35.2 | EntrezGene:818475 | UniProt:A0A178W1U1 | ProteinID:AAM15078.1 | ProteinID:AEC09610.1 | ArrayExpress:AT2G38905 |
| EnsemblPlantsGene:AT2G38905 | RefSeq:AT2G38905 | TAIR:AT2G38905 | RefSeq:AT2G38905-TAIR-G | EnsemblPlants:AT2G38905.1 | TAIR:AT2G38905.1 |
| EMBL:AY052231 | EMBL:AY060504 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_565897.1 |
| ProteinID:OAP11303.1 | PFAM:PF01679 | InterPro:PMP3 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01309 |
| PANTHER:PTHR21659 | PANTHER:PTHR21659:SF53 | UniProt:Q941D7 | TMHMM:TMhelix | UniParc:UPI00000A520F | : |
Description
At2g38901/At2g38901 [Source:UniProtKB/TrEMBL;Acc:Q941D7]
Coordinates
chr2:-:16244061..16244531
Molecular Weight (calculated)
5947.7 Da
IEP (calculated)
3.980
GRAVY (calculated)
1.620
Length
54 amino acids
Sequence
(BLAST)
(BLAST)
1: MGSETFLEII LAILLPPVGV FLRYGCGVEF WICLLLTILG YIPGIIYAIY VLVG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.