Factsheet for Bra017095.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18362	Canola	endoplasmic reticulum, extracellular, plasma membrane	100.0	100.0
CDX93294	Canola	endoplasmic reticulum, extracellular, plasma membrane	100.0	100.0
Bra000104.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	96.3	96.3
AT2G38905.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	94.44	94.44
KRH57776	Soybean	endoplasmic reticulum, plasma membrane, vacuole	92.59	92.59
Solyc04g049960.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	92.59	92.59
VIT_13s0019g03650.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	90.74	90.74
TraesCS1D01G062900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
TraesCS1B01G080300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
EES18938	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
GSMUA_Achr7P15490_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
TraesCS1A01G062000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
KRH04745	Soybean	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
TraesCS4A01G107100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	87.04	87.04
TraesCS4B01G197300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	87.04	87.04
TraesCS4D01G197700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	87.04	87.04
Zm00001d035505_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	87.04	87.04
HORVU4Hr1G057020.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
TraesCS4A01G107000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
TraesCS4D01G197800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
Os05t0122700-01	Rice	endoplasmic reticulum, plasma membrane	81.48	81.48
Bra041021.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	74.07	74.07
Bra001171.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	66.67	65.45
HORVU4Hr1G057000.1	Barley	plasma membrane	87.04	52.81
Bra011208.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	66.67	48.65
Bra032129.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	64.81	46.67
Bra024053.1-P	Field mustard	endoplasmic reticulum, plasma membrane	64.81	46.67
Bra026283.1-P	Field mustard	endoplasmic reticulum, extracellular	64.81	45.45
Bra011209.1-P	Field mustard	extracellular	62.96	45.33

Protein Annotations

EnsemblPlants:Bra017095.1	EnsemblPlants:Bra017095.1-P	EnsemblPlantsGene:Bra017095	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PMP3	PANTHER:PTHR21659	PANTHER:PTHR21659:SF53	PFAM:PF01679	ScanProsite:PS01309	TMHMM:TMhelix
UniParc:UPI00025449D9	UniProt:M4DKR4	MapMan:35.2	:	:	:

Description

AT2G38905 (E=3e-025) | hydrophobic protein, putative / low temperature and salt responsive protein, putative

Coordinates

chrA04:-:16629825..16630076

Molecular Weight (calculated)

5961.7 Da

IEP (calculated)

3.980

GRAVY (calculated)

1.694

Length

54 amino acids

Sequence
(BLAST)

1: MGSETFLEVI LAILLPPVGV FLRYGCGVEF WICLLLTVLG YIPGIIYAIY VLVV

Best Arabidopsis Sequence Match ( AT2G38905.1 )
(BLAST)

1: MGSETFLEII LAILLPPVGV FLRYGCGVEF WICLLLTILG YIPGIIYAIY VLVG

Arabidopsis Description

At2g38901/At2g38901 [Source:UniProtKB/TrEMBL;Acc:Q941D7]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.