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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017095.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 100.0 100.0
CDX93294 Canola endoplasmic reticulum, extracellular, plasma membrane 100.0 100.0
CDY14420 Canola endoplasmic reticulum, extracellular, plasma membrane 96.3 96.3
CDY07689 Canola endoplasmic reticulum, extracellular, plasma membrane 96.3 96.3
AT2G38905.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 94.44 94.44
KRH57776 Soybean endoplasmic reticulum, plasma membrane, vacuole 92.59 92.59
Solyc04g049960.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 92.59 92.59
VIT_13s0019g03650.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 90.74 90.74
EES18938 Sorghum endoplasmic reticulum, plasma membrane, vacuole 88.89 88.89
GSMUA_Achr7P15490_001 Banana endoplasmic reticulum, plasma membrane, vacuole 88.89 88.89
KRH04745 Soybean endoplasmic reticulum, plasma membrane, vacuole 88.89 88.89
TraesCS1A01G062000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 88.89 88.89
TraesCS1B01G080300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 88.89 88.89
TraesCS1D01G062900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 88.89 88.89
TraesCS4A01G107100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 87.04 87.04
TraesCS4B01G197300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 87.04 87.04
TraesCS4D01G197700.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 87.04 87.04
Zm00001d035505_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 87.04 87.04
TraesCS4D01G197800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 83.33 83.33
TraesCS4A01G107000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 83.33 83.33
HORVU4Hr1G057020.2 Barley endoplasmic reticulum, plasma membrane, vacuole 83.33 83.33
Os05t0122700-01 Rice endoplasmic reticulum, plasma membrane 81.48 81.48
CDY49984 Canola endoplasmic reticulum, plasma membrane, vacuole 75.93 75.93
CDY05209 Canola endoplasmic reticulum, plasma membrane, vacuole 74.07 74.07
CDX74126 Canola endoplasmic reticulum, plasma membrane, vacuole 66.67 65.45
CDY49985 Canola endoplasmic reticulum, plasma membrane, vacuole 64.81 63.64
CDY23796 Canola endoplasmic reticulum, plasma membrane, vacuole 61.11 63.46
CDY31781 Canola endoplasmic reticulum, plasma membrane, vacuole 59.26 61.54
CDY71166 Canola endoplasmic reticulum, plasma membrane, vacuole 59.26 61.54
CDY48407 Canola endoplasmic reticulum, plasma membrane, vacuole 57.41 59.62
CDX88232 Canola golgi, plasma membrane, vacuole 66.67 58.06
CDY71498 Canola endoplasmic reticulum, plasma membrane, vacuole 55.56 57.69
CDX80578 Canola golgi, plasma membrane, vacuole 66.67 54.55
HORVU4Hr1G057000.1 Barley plasma membrane 87.04 52.81
CDY28200 Canola endoplasmic reticulum, extracellular, plasma membrane 66.67 48.65
CDX68682 Canola endoplasmic reticulum, plasma membrane 66.67 48.65
CDY20271 Canola endoplasmic reticulum, extracellular, plasma membrane 64.81 46.67
CDY39689 Canola endoplasmic reticulum, extracellular, plasma membrane 64.81 46.67
CDX72260 Canola endoplasmic reticulum, plasma membrane 64.81 46.67
CDY39234 Canola endoplasmic reticulum, plasma membrane 64.81 46.67
CDX68683 Canola extracellular 62.96 45.33
CDY28201 Canola extracellular 62.96 45.33
CDX81520 Canola endoplasmic reticulum, extracellular, vacuole 59.26 42.67
CDX73908 Canola endoplasmic reticulum, extracellular, vacuole 59.26 42.67
CDX87926 Canola endoplasmic reticulum, plasma membrane, vacuole 57.41 41.33
CDX77737 Canola plasma membrane 61.11 19.41
Protein Annotations
EnsemblPlants:CDY18362EnsemblPlantsGene:GSBRNA2T00005345001GO:A0A078DXX5GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:PMP3PANTHER:PTHR21659PANTHER:PTHR21659:SF53PFAM:PF01679ProteinID:CDY18362ProteinID:CDY18362.1
ScanProsite:PS01309TMHMM:TMhelixUniParc:UPI00025449D9UniProt:A0A078DXX5MapMan:35.2:
Description
BnaA04g22250DBnaA04g22250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078DXX5]
Coordinates
chrLK032085:+:48988..49402
Molecular Weight (calculated)
5961.7 Da
IEP (calculated)
3.980
GRAVY (calculated)
1.694
Length
54 amino acids
Sequence
(BLAST)
1: MGSETFLEVI LAILLPPVGV FLRYGCGVEF WICLLLTVLG YIPGIIYAIY VLVV
Best Arabidopsis Sequence Match ( AT2G38905.1 )
(BLAST)
1: MGSETFLEII LAILLPPVGV FLRYGCGVEF WICLLLTILG YIPGIIYAIY VLVG
Arabidopsis Description
At2g38901/At2g38901 [Source:UniProtKB/TrEMBL;Acc:Q941D7]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.