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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011208.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 97.3 97.3
CDY28200 Canola endoplasmic reticulum, extracellular, plasma membrane 97.3 97.3
AT4G30650.1 Thale cress endoplasmic reticulum, extracellular, vacuole 90.54 91.78
CDY39234 Canola endoplasmic reticulum, plasma membrane 72.97 72.0
CDX72260 Canola endoplasmic reticulum, plasma membrane 72.97 72.0
CDY28201 Canola extracellular 71.62 70.67
CDX68683 Canola extracellular 71.62 70.67
CDX81520 Canola endoplasmic reticulum, extracellular, vacuole 70.27 69.33
CDX73908 Canola endoplasmic reticulum, extracellular, vacuole 70.27 69.33
CDX74126 Canola endoplasmic reticulum, plasma membrane, vacuole 51.35 69.09
CDY49984 Canola endoplasmic reticulum, plasma membrane, vacuole 50.0 68.52
CDY49985 Canola endoplasmic reticulum, plasma membrane, vacuole 50.0 67.27
CDX87926 Canola endoplasmic reticulum, plasma membrane, vacuole 67.57 66.67
CDX93294 Canola endoplasmic reticulum, extracellular, plasma membrane 48.65 66.67
CDY05209 Canola endoplasmic reticulum, plasma membrane, vacuole 48.65 66.67
CDY07689 Canola endoplasmic reticulum, extracellular, plasma membrane 48.65 66.67
CDY14420 Canola endoplasmic reticulum, extracellular, plasma membrane 48.65 66.67
CDY18362 Canola endoplasmic reticulum, extracellular, plasma membrane 48.65 66.67
Solyc07g005730.2.1 Tomato endoplasmic reticulum, extracellular 63.51 66.2
PGSC0003DMT400028949 Potato endoplasmic reticulum, extracellular 62.16 64.79
CDY20271 Canola endoplasmic reticulum, extracellular, plasma membrane 63.51 62.67
CDY39689 Canola endoplasmic reticulum, extracellular, plasma membrane 62.16 61.33
Solyc07g005720.2.1 Tomato endoplasmic reticulum, plasma membrane 58.11 60.56
GSMUA_Achr7P19400_001 Banana extracellular, golgi, vacuole 54.05 59.7
CDX88232 Canola golgi, plasma membrane, vacuole 50.0 59.68
GSMUA_Achr7P16140_001 Banana endoplasmic reticulum, extracellular, golgi 51.35 55.07
CDX80578 Canola golgi, plasma membrane, vacuole 48.65 54.55
CDY31781 Canola endoplasmic reticulum, plasma membrane, vacuole 36.49 51.92
Os06t0184800-01 Rice plasma membrane 52.7 51.32
CDY71498 Canola endoplasmic reticulum, plasma membrane, vacuole 35.14 50.0
CDY71166 Canola endoplasmic reticulum, plasma membrane, vacuole 35.14 50.0
CDY23796 Canola endoplasmic reticulum, plasma membrane, vacuole 35.14 50.0
TraesCS7D01G150900.1 Wheat extracellular, golgi, vacuole 51.35 50.0
TraesCS7A01G149300.1 Wheat extracellular, golgi, plasma membrane 50.0 48.68
CDY48407 Canola endoplasmic reticulum, plasma membrane, vacuole 33.78 48.08
Zm00001d045096_P001 Maize endoplasmic reticulum, extracellular, golgi 47.3 46.67
EER89340 Sorghum extracellular, golgi 47.3 46.05
CDX77737 Canola plasma membrane 67.57 29.41
TraesCS7B01G053000.1 Wheat cytosol, nucleus, plasma membrane 50.0 19.37
Protein Annotations
EnsemblPlants:CDX68682EnsemblPlantsGene:GSBRNA2T00130359001GO:A0A078BWQ1GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:PMP3PANTHER:PTHR21659PANTHER:PTHR21659:SF34PFAM:PF01679ProteinID:CDX68682ProteinID:CDX68682.1
ScanProsite:PS01309SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EC66A1MapMan:35.1:
Description
BnaC01g07710D
Coordinates
chrLK031789:+:743625..744223
Molecular Weight (calculated)
8141.3 Da
IEP (calculated)
4.133
GRAVY (calculated)
0.961
Length
74 amino acids
Sequence
(BLAST)
1: MASNMEVFCE ILIAILLPPL GVCLKRGCCT VEFLICLVLT ILGYIPGIIY ALYVIVFQNR EGETPDYSTP LNSA
Best Arabidopsis Sequence Match ( AT4G30650.1 )
(BLAST)
1: MASNMEVFCE ILIAILLPPL GVCLKRGCCT VEFLICLVLT ILGYIPGIIY ALYVIVFQNR EGSTELGAPL NSA
Arabidopsis Description
UPF0057 membrane protein At4g30650 [Source:UniProtKB/Swiss-Prot;Acc:Q9M095]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.