Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 6
- vacuole 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011208.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 100.0 | 100.0 |
| CDX68682 | Canola | endoplasmic reticulum, plasma membrane | 97.3 | 97.3 |
| AT4G30650.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 91.89 | 93.15 |
| CDY39234 | Canola | endoplasmic reticulum, plasma membrane | 72.97 | 72.0 |
| CDX72260 | Canola | endoplasmic reticulum, plasma membrane | 72.97 | 72.0 |
| CDY28201 | Canola | extracellular | 71.62 | 70.67 |
| CDX68683 | Canola | extracellular | 71.62 | 70.67 |
| CDX73908 | Canola | endoplasmic reticulum, extracellular, vacuole | 70.27 | 69.33 |
| CDX81520 | Canola | endoplasmic reticulum, extracellular, vacuole | 70.27 | 69.33 |
| CDX74126 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 51.35 | 69.09 |
| CDY49984 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 50.0 | 68.52 |
| CDY49985 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 50.0 | 67.27 |
| CDX93294 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.65 | 66.67 |
| CDY05209 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 48.65 | 66.67 |
| CDY07689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.65 | 66.67 |
| CDY14420 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.65 | 66.67 |
| CDY18362 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.65 | 66.67 |
| CDX87926 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 67.57 | 66.67 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 63.51 | 66.2 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 60.81 | 63.38 |
| CDY20271 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.51 | 62.67 |
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 62.16 | 61.33 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 58.11 | 60.56 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 54.05 | 59.7 |
| CDX88232 | Canola | golgi, plasma membrane, vacuole | 50.0 | 59.68 |
| GSMUA_Achr7P16140_001 | Banana | endoplasmic reticulum, extracellular, golgi | 52.7 | 56.52 |
| CDX80578 | Canola | golgi, plasma membrane, vacuole | 48.65 | 54.55 |
| CDY31781 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.49 | 51.92 |
| Os06t0184800-01 | Rice | plasma membrane | 52.7 | 51.32 |
| CDY23796 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 35.14 | 50.0 |
| CDY71166 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 35.14 | 50.0 |
| CDY71498 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 35.14 | 50.0 |
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 51.35 | 50.0 |
| TraesCS7A01G149300.1 | Wheat | extracellular, golgi, plasma membrane | 50.0 | 48.68 |
| CDY48407 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.78 | 48.08 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 47.3 | 46.67 |
| EER89340 | Sorghum | extracellular, golgi | 47.3 | 46.05 |
| CDX77737 | Canola | plasma membrane | 67.57 | 29.41 |
| TraesCS7B01G053000.1 | Wheat | cytosol, nucleus, plasma membrane | 50.0 | 19.37 |
Protein Annotations
| EnsemblPlants:CDY28200 | EnsemblPlantsGene:GSBRNA2T00039921001 | GO:A0A078GNT5 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PMP3 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF34 | PFAM:PF01679 | ProteinID:CDY28200 | ProteinID:CDY28200.1 |
| ScanProsite:PS01309 | SignalP:SignalP-TM | TMHMM:TMhelix | unigene:Bna.2325 | UniParc:UPI00003B12DC | UniProt:A0A078GNT5 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA01g06490DBnaA01g06490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNT5]
Coordinates
chrLK032216:+:239054..239782
Molecular Weight (calculated)
8142.3 Da
IEP (calculated)
4.133
GRAVY (calculated)
0.969
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MASNMEVFCE ILIAILLPPL GVCLKRGCCT VEFLICLVLT ILGYIPGIIY ALYVIVFQNR EGETQDYSAP LNSA
1: MASNMEVFCE ILIAILLPPL GVCLKRGCCT VEFLICLVLT ILGYIPGIIY ALYVIVFQNR EGSTELGAPL NSA
Arabidopsis Description
UPF0057 membrane protein At4g30650 [Source:UniProtKB/Swiss-Prot;Acc:Q9M095]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.