Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G30650.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 29.41 | 68.49 |
| Bra011208.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 29.41 | 67.57 |
| CDY28200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.41 | 67.57 |
| CDX68682 | Canola | endoplasmic reticulum, plasma membrane | 29.41 | 67.57 |
| CDX74126 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.0 | 61.82 |
| CDX93294 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.41 | 61.11 |
| CDY07689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.41 | 61.11 |
| CDY14420 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.41 | 61.11 |
| CDY18362 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.41 | 61.11 |
| CDY49985 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 19.41 | 60.0 |
| CDX72260 | Canola | endoplasmic reticulum, plasma membrane | 26.47 | 60.0 |
| CDY39234 | Canola | endoplasmic reticulum, plasma membrane | 26.47 | 60.0 |
| CDY49984 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 18.82 | 59.26 |
| CDX73908 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.88 | 58.67 |
| CDX81520 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.88 | 58.67 |
| CDY05209 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 18.24 | 57.41 |
| CDY28201 | Canola | extracellular | 25.29 | 57.33 |
| CDX87926 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.29 | 57.33 |
| CDX68683 | Canola | extracellular | 25.29 | 57.33 |
| CDX88232 | Canola | golgi, plasma membrane, vacuole | 20.59 | 56.45 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 23.53 | 56.34 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 22.94 | 54.93 |
| CDY20271 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 24.12 | 54.67 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 21.18 | 53.73 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 22.35 | 53.52 |
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 23.53 | 53.33 |
| CDY71166 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.88 | 51.92 |
| CDY23796 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.88 | 51.92 |
| CDY71498 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.88 | 51.92 |
| CDY31781 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.88 | 51.92 |
| CDX80578 | Canola | golgi, plasma membrane, vacuole | 20.0 | 51.52 |
| GSMUA_Achr7P16140_001 | Banana | endoplasmic reticulum, extracellular, golgi | 20.59 | 50.72 |
| CDY48407 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.29 | 50.0 |
| Os06t0184800-01 | Rice | plasma membrane | 20.0 | 44.74 |
| EER89340 | Sorghum | extracellular, golgi | 18.82 | 42.11 |
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 18.82 | 42.11 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 18.24 | 41.33 |
| TraesCS7A01G149300.1 | Wheat | extracellular, golgi, plasma membrane | 18.24 | 40.79 |
| TraesCS7B01G053000.1 | Wheat | cytosol, nucleus, plasma membrane | 18.24 | 16.23 |
Protein Annotations
| KEGG:00670+2.1.2.9 | KEGG:00970+2.1.2.9 | Gene3D:3.40.50.170 | MapMan:35.1 | GO:A0A078CLV9 | EnsemblPlants:CDX77737 |
| ProteinID:CDX77737 | ProteinID:CDX77737.1 | InterPro:Formyl_transf_N_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016742 | EnsemblPlantsGene:GSBRNA2T00128758001 | PFAM:PF01679 | InterPro:PMP3 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF34 |
| SUPFAM:SSF53328 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE6AC7 | : | : |
Description
BnaC07g19910D
Coordinates
chrLK031812:+:1462854..1464314
Molecular Weight (calculated)
19269.3 Da
IEP (calculated)
8.982
GRAVY (calculated)
0.391
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNMEIFCE ILIAILLPPP GVCLKRGCCT LEFLICFVLT ILGYIPGIIY AIRDRVSEPF FVQAFDAGVK LIGATSHFVT EELDARPIIK QMVTLSANYL
101: ISTFYKMIVK HKRTCRLWSY TRVSGKMKIM GIVKKHVTVK MNCTMDVTVN IPRRQAIQDV ECNCKNNIDL
101: ISTFYKMIVK HKRTCRLWSY TRVSGKMKIM GIVKKHVTVK MNCTMDVTVN IPRRQAIQDV ECNCKNNIDL
1: MASNMEVFCE ILIAILLPPL GVCLKRGCCT VEFLICLVLT ILGYIPGIIY ALYVIVFQNR EGSTELGAPL NSA
Arabidopsis Description
UPF0057 membrane protein At4g30650 [Source:UniProtKB/Swiss-Prot;Acc:Q9M095]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.