Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 39.27 | 98.68 |
| TraesCS7A01G149300.1 | Wheat | extracellular, golgi, plasma membrane | 39.27 | 98.68 |
| Os06t0184800-01 | Rice | plasma membrane | 34.55 | 86.84 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 34.03 | 86.67 |
| EER89340 | Sorghum | extracellular, golgi | 34.03 | 85.53 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 23.04 | 65.67 |
| AT2G24040.1 | Thale cress | plasma membrane | 21.99 | 56.0 |
| VIT_11s0037g00420.t01 | Wine grape | extracellular | 20.94 | 55.56 |
| TraesCS5B01G362400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 20.42 | 54.93 |
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 21.47 | 54.67 |
| CDY20271 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 21.47 | 54.67 |
| Bra032129.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 21.47 | 54.67 |
| TraesCS1B01G100100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 15.71 | 54.55 |
| Bra026283.1-P | Field mustard | endoplasmic reticulum, extracellular | 21.99 | 54.55 |
| AT4G30660.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 20.94 | 54.05 |
| TraesCS4B01G197300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 15.18 | 53.7 |
| TraesCS1B01G080300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 15.18 | 53.7 |
| AT4G28088.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 21.47 | 53.25 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 19.37 | 52.11 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 19.37 | 52.11 |
| TraesCS5B01G362500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 19.37 | 50.68 |
| CDY39234 | Canola | endoplasmic reticulum, plasma membrane | 19.9 | 50.67 |
| Bra024053.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 19.9 | 50.67 |
| CDX72260 | Canola | endoplasmic reticulum, plasma membrane | 19.9 | 50.67 |
| CDY28200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.37 | 50.0 |
| CDX68682 | Canola | endoplasmic reticulum, plasma membrane | 19.37 | 50.0 |
| Bra011208.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 19.37 | 50.0 |
| CDY28201 | Canola | extracellular | 19.37 | 49.33 |
| CDX68683 | Canola | extracellular | 19.37 | 49.33 |
| Bra011209.1-P | Field mustard | extracellular | 19.37 | 49.33 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 18.32 | 49.3 |
| TraesCS2B01G177100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 14.66 | 49.12 |
| AT4G30650.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 18.32 | 47.95 |
| TraesCS7B01G411400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 18.85 | 47.37 |
| CDX73908 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.32 | 46.67 |
| TraesCS7B01G411100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 18.32 | 45.45 |
| CDX81520 | Canola | endoplasmic reticulum, extracellular, vacuole | 17.8 | 45.33 |
| CDX87926 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 17.28 | 44.0 |
| KRH72320 | Soybean | plasma membrane | 17.28 | 29.73 |
| TraesCS2B01G603700.1 | Wheat | plasma membrane | 13.09 | 18.8 |
| CDX77737 | Canola | plasma membrane | 16.23 | 18.24 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G053000.1 | EnsemblPlantsGene:TraesCS7B01G053000 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PMP3 |
| PANTHER:PTHR21659 | PANTHER:PTHR21659:SF33 | PFAM:PF01679 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr7B:-:55853495..55854166
Molecular Weight (calculated)
21640.4 Da
IEP (calculated)
10.106
GRAVY (calculated)
-0.415
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVAFQILSL NTQFDRTRER VIKPELTCKA GPTDRAAVPR RTSSQPNPHK SRGPRLRVSQ SNQPSRDLPH RKTEPRTHRW SSSPPLPQLR PRLRVRRPRA
101: TQPETAAGER TAMGLCSCCC RCLEIMCAIL LPPLGVCLRH GCCSMEFWIS VLLTILGYLP GVLYAAYVIC SVDPDRVRRR GDSDDDYIYV A
101: TQPETAAGER TAMGLCSCCC RCLEIMCAIL LPPLGVCLRH GCCSMEFWIS VLLTILGYLP GVLYAAYVIC SVDPDRVRRR GDSDDDYIYV A
1: MANGCEICCE IMIAILIPPL GVCLRHGCCT TEFMICLILT LLGYVPGIIY ALYAIVYVDR DQFFDEYRRP LFYAQSP
Arabidopsis Description
Low temperature and salt responsive protein family [Source:UniProtKB/TrEMBL;Acc:F4JKH9]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.