Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89340 | Sorghum | extracellular, golgi | 97.33 | 96.05 |
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 88.0 | 86.84 |
| TraesCS7A01G149300.1 | Wheat | extracellular, golgi, plasma membrane | 86.67 | 85.53 |
| Os06t0184800-01 | Rice | plasma membrane | 81.33 | 80.26 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 56.0 | 62.69 |
| Zm00001d035505_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 40.0 | 55.56 |
| Zm00001d028718_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 40.0 | 55.56 |
| VIT_11s0037g00420.t01 | Wine grape | extracellular | 49.33 | 51.39 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 48.0 | 50.7 |
| Zm00001d006329_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 48.0 | 50.0 |
| CDY20271 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 49.33 | 49.33 |
| AT2G24040.1 | Thale cress | plasma membrane | 49.33 | 49.33 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 46.67 | 49.3 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 46.67 | 49.3 |
| Zm00001d008200_P001 | Maize | golgi, plasma membrane, vacuole | 37.33 | 49.12 |
| AT4G30660.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 48.0 | 48.65 |
| Zm00001d024778_P001 | Maize | plasma membrane | 37.33 | 48.28 |
| Bra026283.1-P | Field mustard | endoplasmic reticulum, extracellular | 49.33 | 48.05 |
| Bra032129.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 48.0 | 48.0 |
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.0 | 48.0 |
| Zm00001d040544_P001 | Maize | golgi, plasma membrane, vacuole | 36.0 | 47.37 |
| CDX68682 | Canola | endoplasmic reticulum, plasma membrane | 46.67 | 47.3 |
| CDY28200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 46.67 | 47.3 |
| Bra011208.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 46.67 | 47.3 |
| AT4G28088.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 48.0 | 46.75 |
| CDY39234 | Canola | endoplasmic reticulum, plasma membrane | 46.67 | 46.67 |
| CDY28201 | Canola | extracellular | 46.67 | 46.67 |
| CDX73908 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.67 | 46.67 |
| CDX72260 | Canola | endoplasmic reticulum, plasma membrane | 46.67 | 46.67 |
| CDX68683 | Canola | extracellular | 46.67 | 46.67 |
| Bra024053.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 46.67 | 46.67 |
| Bra011209.1-P | Field mustard | extracellular | 46.67 | 46.67 |
| Zm00001d047419_P001 | Maize | extracellular, golgi, vacuole | 37.33 | 46.67 |
| Zm00001d022264_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 34.67 | 46.43 |
| AT4G30650.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 44.0 | 45.21 |
| Zm00001d046834_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 45.33 | 44.74 |
| CDX87926 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.0 | 44.0 |
| CDX81520 | Canola | endoplasmic reticulum, extracellular, vacuole | 42.67 | 42.67 |
| TraesCS7B01G053000.1 | Wheat | cytosol, nucleus, plasma membrane | 86.67 | 34.03 |
| KRH72320 | Soybean | plasma membrane | 38.67 | 26.13 |
| CDX77737 | Canola | plasma membrane | 41.33 | 18.24 |
Protein Annotations
| EMBL:EU962407 | EnsemblPlants:Zm00001d045096_P001 | EnsemblPlants:Zm00001d045096_T001 | EnsemblPlantsGene:Zm00001d045096 | EntrezGene:100285363 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:PMP3 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF33 | PFAM:PF01679 |
| ProteinID:AQL01531.1 | ScanProsite:PS01309 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000182C3C6 |
| UniProt:B6TBP2 | MapMan:35.2 | : | : | : | : |
Description
proteolipid membrane potential regulator3Hydrophobic protein LTI6B%3B Hydrophobic protein LTI6B isoform 1%3B Hydrophobic protein LTI6B isoform 2
Coordinates
chr9:+:12384425..12385209
Molecular Weight (calculated)
8385.5 Da
IEP (calculated)
6.190
GRAVY (calculated)
0.844
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MGLCSCCCRC LELLCSVLLP PLGVCLRHGC CSMEFWISVL LTILGYLPGV LYAVYVICSV DPHRHRDNDD YVYVA
1: MASSCELCCE IFIAILLPPV GVCLRHGCCT VEFFICLILT CLGYLPGIIY AIYAICFLHR DEYFDEYRRP IYYVA
Arabidopsis Description
Putative low temperature and salt responsive protein [Source:UniProtKB/TrEMBL;Acc:B6DVK0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.