Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97173 | Sorghum | endoplasmic reticulum, extracellular | 94.44 | 94.44 |
| Os09t0558100-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 88.89 | 88.89 |
| TraesCS5B01G362400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 76.39 | 77.46 |
| Zm00001d035505_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 55.56 | 74.07 |
| GSMUA_Achr4P04270_001 | Banana | plasma membrane | 73.61 | 72.6 |
| Zm00001d028718_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 54.17 | 72.22 |
| GSMUA_Achr4P12770_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 72.22 | 71.23 |
| TraesCS5D01G369400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 72.22 | 71.23 |
| TraesCS5A01G360000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 70.83 | 69.86 |
| TraesCS5B01G362500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 69.44 | 68.49 |
| Zm00001d008200_P001 | Maize | golgi, plasma membrane, vacuole | 48.61 | 61.4 |
| Zm00001d024778_P001 | Maize | plasma membrane | 48.61 | 60.34 |
| Zm00001d040544_P001 | Maize | golgi, plasma membrane, vacuole | 47.22 | 59.65 |
| Zm00001d022264_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 45.83 | 58.93 |
| Zm00001d047419_P001 | Maize | extracellular, golgi, vacuole | 44.44 | 53.33 |
| Zm00001d046834_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 51.39 | 48.68 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 50.0 | 48.0 |
Protein Annotations
| EMBL:EU954637 | EMBL:EU959002 | EnsemblPlants:Zm00001d006329_P001 | EnsemblPlants:Zm00001d006329_T001 | EnsemblPlantsGene:Zm00001d006329 | EntrezGene:100303875 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PMP3 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF34 |
| PFAM:PF01679 | ProteinID:ONM23533.1 | ScanProsite:PS01309 | TMHMM:TMhelix | UniParc:UPI000182AF82 | UniProt:B6SPH2 |
| MapMan:35.1 | : | : | : | : | : |
Description
proteolipid membrane potential regulator2Hydrophobic protein RCI2B
Coordinates
chr2:+:204888454..204889753
Molecular Weight (calculated)
8167.3 Da
IEP (calculated)
4.453
GRAVY (calculated)
1.075
Length
72 amino acids
Sequence
(BLAST)
(BLAST)
1: MADGRCCTFL EILFAIILPP LGVFLRFGCC RIEFCICLLL TILGYVPGII YAIYVLVALD SDQHEREYYT LA
1: MANGCEICCE IMIAILIPPL GVCLRHGCCT TEFMICLILT LLGYVPGIIY ALYAIVYVDR DQFFDEYRRP LFYAQSP
Arabidopsis Description
Low temperature and salt responsive protein family [Source:UniProtKB/TrEMBL;Acc:F4JKH9]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.