Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 3
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32309 | Sorghum | golgi, plasma membrane, vacuole | 100.0 | 100.0 |
| Zm00001d008200_P001 | Maize | golgi, plasma membrane, vacuole | 96.49 | 96.49 |
| Zm00001d024778_P001 | Maize | plasma membrane | 85.96 | 84.48 |
| GSMUA_Achr2P18430_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 80.7 | 80.7 |
| Zm00001d022264_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 75.44 | 76.79 |
| CDX88232 | Canola | golgi, plasma membrane, vacuole | 82.46 | 75.81 |
| CDX80578 | Canola | golgi, plasma membrane, vacuole | 80.7 | 69.7 |
| Zm00001d035505_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 57.89 | 61.11 |
| Zm00001d028718_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 54.39 | 57.41 |
| Zm00001d047419_P001 | Maize | extracellular, golgi, vacuole | 56.14 | 53.33 |
| Zm00001d006329_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 59.65 | 47.22 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 47.37 | 36.0 |
| Zm00001d046834_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 47.37 | 35.53 |
Protein Annotations
| EntrezGene:100285273 | EntrezGene:100285475 | MapMan:35.1 | UniProt:B6U2M6 | EMBL:EU971491 | EMBL:EU972431 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | ProteinID:ONM31521.1 | PFAM:PF01679 | InterPro:PMP3 |
| ScanProsite:PS01309 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF59 | TMHMM:TMhelix | UniParc:UPI000182F39A | EnsemblPlantsGene:Zm00001d040544 |
| EnsemblPlants:Zm00001d040544_P001 | EnsemblPlants:Zm00001d040544_T001 | : | : | : | : |
Description
proteolipid membrane potential regulator8Hydrophobic protein LTI6B
Coordinates
chr3:+:48922461..48923574
Molecular Weight (calculated)
6351.2 Da
IEP (calculated)
6.282
GRAVY (calculated)
1.225
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MKEGTANCVD ILIAIILPPL GVFLKFGCKV EFWLCLLLTF LAYLPGIIYA IYAITKD
1: MSTATFVEII LAIILPPLGV FLKFGCKVEF WICLILTLFG YLPGILYALY IITK
Arabidopsis Description
RCI2BRCI2B [Source:UniProtKB/TrEMBL;Acc:A0A178VG66]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.