Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011209.1-P | Field mustard | extracellular | 100.0 | 100.0 |
| CDX68683 | Canola | extracellular | 100.0 | 100.0 |
| CDY39234 | Canola | endoplasmic reticulum, plasma membrane | 93.33 | 93.33 |
| CDX73908 | Canola | endoplasmic reticulum, extracellular, vacuole | 92.0 | 92.0 |
| CDX72260 | Canola | endoplasmic reticulum, plasma membrane | 90.67 | 90.67 |
| CDX81520 | Canola | endoplasmic reticulum, extracellular, vacuole | 90.67 | 90.67 |
| CDX87926 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 88.0 | 88.0 |
| AT4G30660.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 81.33 | 82.43 |
| CDY20271 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 73.33 | 73.33 |
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 72.0 | 72.0 |
| CDY28200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 70.67 | 71.62 |
| CDX68682 | Canola | endoplasmic reticulum, plasma membrane | 70.67 | 71.62 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 62.67 | 66.2 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 62.67 | 66.2 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 62.67 | 66.2 |
| CDY49985 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 48.0 | 65.45 |
| CDX74126 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 48.0 | 65.45 |
| CDY49984 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.67 | 64.81 |
| CDX93294 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.33 | 62.96 |
| CDY05209 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 45.33 | 62.96 |
| CDY07689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.33 | 62.96 |
| CDY18362 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.33 | 62.96 |
| CDY14420 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.33 | 62.96 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 52.0 | 58.21 |
| GSMUA_Achr7P16140_001 | Banana | endoplasmic reticulum, extracellular, golgi | 50.67 | 55.07 |
| CDX88232 | Canola | golgi, plasma membrane, vacuole | 44.0 | 53.23 |
| Os06t0184800-01 | Rice | plasma membrane | 53.33 | 52.63 |
| CDY71166 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.0 | 51.92 |
| CDY31781 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 34.67 | 50.0 |
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 50.67 | 50.0 |
| TraesCS7A01G149300.1 | Wheat | extracellular, golgi, plasma membrane | 49.33 | 48.68 |
| CDX80578 | Canola | golgi, plasma membrane, vacuole | 42.67 | 48.48 |
| CDY71498 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.33 | 48.08 |
| CDY48407 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.33 | 48.08 |
| CDY23796 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.33 | 48.08 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 46.67 | 46.67 |
| EER89340 | Sorghum | extracellular, golgi | 46.67 | 46.05 |
| CDX77737 | Canola | plasma membrane | 57.33 | 25.29 |
| TraesCS7B01G053000.1 | Wheat | cytosol, nucleus, plasma membrane | 49.33 | 19.37 |
Protein Annotations
| EnsemblPlants:CDY28201 | EnsemblPlantsGene:GSBRNA2T00039922001 | GO:A0A078GRV6 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PMP3 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF34 | PFAM:PF01679 | ProteinID:CDY28201 | ProteinID:CDY28201.1 |
| ScanProsite:PS01309 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002546D90 | UniProt:A0A078GRV6 | MapMan:35.1 |
Description
BnaA01g06480DBnaA01g06480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRV6]
Coordinates
chrLK032216:+:244999..245529
Molecular Weight (calculated)
8519.8 Da
IEP (calculated)
4.506
GRAVY (calculated)
0.855
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MPSKCEILCE ILIAILLPPL GVCLRRGCCT VEFLACLILT ILGYVPGIIY ALYVIVFQNQ EEYFDEARRP LYYSA
1: MPSNCEILCE IIIAILLPPL GVCFRKGCCT VEFLICLVLT ILGYVPGIIY AIYVIVFQHR EEYFDEYRRP IYSA
Arabidopsis Description
UPF0057 membrane protein At4g30660 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUI0]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.