Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 97.37 | 97.37 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 85.53 | 86.67 |
| Os06t0184800-01 | Rice | plasma membrane | 85.53 | 85.53 |
| EER89340 | Sorghum | extracellular, golgi | 85.53 | 85.53 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 57.89 | 65.67 |
| AT2G24040.1 | Thale cress | plasma membrane | 55.26 | 56.0 |
| VIT_11s0037g00420.t01 | Wine grape | extracellular | 52.63 | 55.56 |
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.95 | 54.67 |
| CDY20271 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.95 | 54.67 |
| Bra032129.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 53.95 | 54.67 |
| Bra026283.1-P | Field mustard | endoplasmic reticulum, extracellular | 55.26 | 54.55 |
| AT4G30660.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 52.63 | 54.05 |
| TraesCS4A01G107100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 38.16 | 53.7 |
| TraesCS1A01G062000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 38.16 | 53.7 |
| AT4G28088.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 53.95 | 53.25 |
| TraesCS1A01G082500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 39.47 | 52.63 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 48.68 | 52.11 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 48.68 | 52.11 |
| TraesCS4A01G107000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 36.84 | 51.85 |
| TraesCS5A01G360000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 48.68 | 50.68 |
| CDX72260 | Canola | endoplasmic reticulum, plasma membrane | 50.0 | 50.67 |
| CDY39234 | Canola | endoplasmic reticulum, plasma membrane | 50.0 | 50.67 |
| Bra024053.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 50.0 | 50.67 |
| Bra011208.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 48.68 | 50.0 |
| CDX68682 | Canola | endoplasmic reticulum, plasma membrane | 48.68 | 50.0 |
| CDY28200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.68 | 50.0 |
| Bra011209.1-P | Field mustard | extracellular | 48.68 | 49.33 |
| CDY28201 | Canola | extracellular | 48.68 | 49.33 |
| CDX68683 | Canola | extracellular | 48.68 | 49.33 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 46.05 | 49.3 |
| TraesCS2A01G152000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 36.84 | 49.12 |
| AT4G30650.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 46.05 | 47.95 |
| TraesCS7A01G504000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 47.37 | 47.37 |
| CDX73908 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.05 | 46.67 |
| CDX81520 | Canola | endoplasmic reticulum, extracellular, vacuole | 44.74 | 45.33 |
| CDX87926 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.42 | 44.0 |
| TraesCS7B01G053000.1 | Wheat | cytosol, nucleus, plasma membrane | 98.68 | 39.27 |
| KRH72320 | Soybean | plasma membrane | 43.42 | 29.73 |
| TraesCS2A01G582800.1 | Wheat | plasma membrane | 31.58 | 22.43 |
| CDX77737 | Canola | plasma membrane | 40.79 | 18.24 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G149300.1 | EnsemblPlantsGene:TraesCS7A01G149300 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PMP3 |
| PANTHER:PTHR21659 | PANTHER:PTHR21659:SF33 | PFAM:PF01679 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr7A:-:102537646..102537985
Molecular Weight (calculated)
8506.7 Da
IEP (calculated)
5.521
GRAVY (calculated)
0.866
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MGLCSCCCRC LEIMCAILLP PLGVCLRHGC CSMEFWISVL LTILGYLPGV LYAAYVICSV DPDRVRRHDD DYIYVA
1: MANGCEICCE IMIAILIPPL GVCLRHGCCT TEFMICLILT LLGYVPGIIY ALYAIVYVDR DQFFDEYRRP LFYAQSP
Arabidopsis Description
Low temperature and salt responsive protein family [Source:UniProtKB/TrEMBL;Acc:F4JKH9]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.