Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 98.67 | 98.67 |
| AT2G24040.1 | Thale cress | plasma membrane | 93.33 | 93.33 |
| CDY39234 | Canola | endoplasmic reticulum, plasma membrane | 78.67 | 78.67 |
| CDX72260 | Canola | endoplasmic reticulum, plasma membrane | 77.33 | 77.33 |
| CDY28201 | Canola | extracellular | 73.33 | 73.33 |
| CDX68683 | Canola | extracellular | 73.33 | 73.33 |
| CDX73908 | Canola | endoplasmic reticulum, extracellular, vacuole | 70.67 | 70.67 |
| CDX81520 | Canola | endoplasmic reticulum, extracellular, vacuole | 69.33 | 69.33 |
| VIT_11s0037g00420.t01 | Wine grape | extracellular | 65.33 | 68.06 |
| CDX87926 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 68.0 | 68.0 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 64.0 | 67.61 |
| CDX74126 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 48.0 | 65.45 |
| CDX93294 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 46.67 | 64.81 |
| CDY49984 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.67 | 64.81 |
| CDY18362 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 46.67 | 64.81 |
| CDY14420 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 46.67 | 64.81 |
| CDY07689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 46.67 | 64.81 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 61.33 | 64.79 |
| CDY49985 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.67 | 63.64 |
| CDX68682 | Canola | endoplasmic reticulum, plasma membrane | 62.67 | 63.51 |
| CDY28200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 62.67 | 63.51 |
| CDY05209 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 45.33 | 62.96 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 57.33 | 60.56 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 53.33 | 59.7 |
| CDX88232 | Canola | golgi, plasma membrane, vacuole | 48.0 | 58.06 |
| Os06t0184800-01 | Rice | plasma membrane | 57.33 | 56.58 |
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 56.0 | 55.26 |
| TraesCS7A01G149300.1 | Wheat | extracellular, golgi, plasma membrane | 54.67 | 53.95 |
| CDX80578 | Canola | golgi, plasma membrane, vacuole | 46.67 | 53.03 |
| CDY71166 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.0 | 51.92 |
| GSMUA_Achr7P16140_001 | Banana | endoplasmic reticulum, extracellular, golgi | 46.67 | 50.72 |
| CDY48407 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 34.67 | 50.0 |
| CDY23796 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 34.67 | 50.0 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 49.33 | 49.33 |
| EER89340 | Sorghum | extracellular, golgi | 49.33 | 48.68 |
| CDY71498 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.33 | 48.08 |
| CDY31781 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.33 | 48.08 |
| KRH72320 | Soybean | plasma membrane | 45.33 | 30.63 |
| CDX77737 | Canola | plasma membrane | 54.67 | 24.12 |
| TraesCS7B01G053000.1 | Wheat | cytosol, nucleus, plasma membrane | 54.67 | 21.47 |
Protein Annotations
| EnsemblPlants:CDY20271 | EnsemblPlantsGene:GSBRNA2T00012179001 | GO:A0A078G4D1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PMP3 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF34 | PFAM:PF01679 | ProteinID:CDY20271 | ProteinID:CDY20271.1 |
| ScanProsite:PS01309 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EEE903 | UniProt:A0A078G4D1 | MapMan:35.1 |
Description
BnaC04g36850DBnaC04g36850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4D1]
Coordinates
chrLK032105:+:161662..162361
Molecular Weight (calculated)
8592.8 Da
IEP (calculated)
4.478
GRAVY (calculated)
1.047
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MVSSCELCCE ILIAILLPPV GVCLRHGCCT VEFFICLVLT CLGYLPGIIY AIYAILFLNR DEYFDEYRRP IYYVA
1: MASSCELCCE IFIAILLPPV GVCLRHGCCT VEFFICLILT CLGYLPGIIY AIYAICFLHR DEYFDEYRRP IYYVA
Arabidopsis Description
Putative low temperature and salt responsive protein [Source:UniProtKB/TrEMBL;Acc:B6DVK0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.