Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G149300.1 | Wheat | extracellular, golgi, plasma membrane | 97.37 | 97.37 |
| Os06t0184800-01 | Rice | plasma membrane | 88.16 | 88.16 |
| Zm00001d045096_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 86.84 | 88.0 |
| EER89340 | Sorghum | extracellular, golgi | 86.84 | 86.84 |
| GSMUA_Achr7P19400_001 | Banana | extracellular, golgi, vacuole | 59.21 | 67.16 |
| VIT_11s0037g00420.t01 | Wine grape | extracellular | 53.95 | 56.94 |
| AT2G24040.1 | Thale cress | plasma membrane | 55.26 | 56.0 |
| CDY20271 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 55.26 | 56.0 |
| TraesCS1D01G062900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 39.47 | 55.56 |
| Bra032129.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 53.95 | 54.67 |
| CDY39689 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.95 | 54.67 |
| TraesCS1D01G083900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 39.47 | 54.55 |
| AT4G30660.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 52.63 | 54.05 |
| TraesCS4D01G197700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 38.16 | 53.7 |
| Solyc07g005730.2.1 | Tomato | endoplasmic reticulum, extracellular | 50.0 | 53.52 |
| PGSC0003DMT400028949 | Potato | endoplasmic reticulum, extracellular | 50.0 | 53.52 |
| TraesCS5D01G369400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 51.32 | 53.42 |
| Bra026283.1-P | Field mustard | endoplasmic reticulum, extracellular | 53.95 | 53.25 |
| CDY39234 | Canola | endoplasmic reticulum, plasma membrane | 51.32 | 52.0 |
| CDX72260 | Canola | endoplasmic reticulum, plasma membrane | 51.32 | 52.0 |
| Bra024053.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 51.32 | 52.0 |
| AT4G28088.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 52.63 | 51.95 |
| TraesCS4D01G197800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 36.84 | 51.85 |
| CDY28200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.0 | 51.35 |
| CDX68682 | Canola | endoplasmic reticulum, plasma membrane | 50.0 | 51.35 |
| Bra011208.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 50.0 | 51.35 |
| Solyc07g005720.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 47.37 | 50.7 |
| Bra011209.1-P | Field mustard | extracellular | 50.0 | 50.67 |
| CDY28201 | Canola | extracellular | 50.0 | 50.67 |
| CDX68683 | Canola | extracellular | 50.0 | 50.67 |
| TraesCS7D01G491000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 48.68 | 49.33 |
| AT4G30650.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 47.37 | 49.32 |
| TraesCS2D01G157100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 36.84 | 49.12 |
| TraesCS7D01G491100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 48.68 | 48.05 |
| CDX73908 | Canola | endoplasmic reticulum, extracellular, vacuole | 47.37 | 48.0 |
| CDX81520 | Canola | endoplasmic reticulum, extracellular, vacuole | 46.05 | 46.67 |
| TraesCS7D01G491500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 46.05 | 46.05 |
| CDX87926 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.74 | 45.33 |
| TraesCS7B01G053000.1 | Wheat | cytosol, nucleus, plasma membrane | 98.68 | 39.27 |
| KRH72320 | Soybean | plasma membrane | 42.11 | 28.83 |
| TraesCS2D01G597300.1 | Wheat | plasma membrane | 31.58 | 20.17 |
| CDX77737 | Canola | plasma membrane | 42.11 | 18.82 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G150900.1 | EnsemblPlantsGene:TraesCS7D01G150900 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PMP3 |
| PANTHER:PTHR21659 | PANTHER:PTHR21659:SF33 | PFAM:PF01679 | ScanProsite:PS01309 | SEG:seg | SignalP:SignalP-TM |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:100280693..100281019
Molecular Weight (calculated)
8507.7 Da
IEP (calculated)
5.669
GRAVY (calculated)
0.874
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MGLCSCCCRC LEILCAILLP PLGVCLRHGC CSMEFWISVL LTILGYLPGV LYAAYVICSV DPDRVRRRDD DYIYVA
1: MASSCELCCE IFIAILLPPV GVCLRHGCCT VEFFICLILT CLGYLPGIIY AIYAICFLHR DEYFDEYRRP IYYVA
Arabidopsis Description
Putative low temperature and salt responsive protein [Source:UniProtKB/TrEMBL;Acc:B6DVK0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.