Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G582800.1 | Wheat | plasma membrane | 85.71 | 95.33 |
| TraesCS2B01G603700.1 | Wheat | plasma membrane | 90.76 | 81.2 |
| TraesCS2D01G157100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.09 | 64.91 |
| TraesCS1D01G083900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.41 | 63.64 |
| CDY49984 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.57 | 62.96 |
| TraesCS4D01G197700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.57 | 62.96 |
| Os03t0370600-00 | Rice | golgi, plasma membrane, vacuole | 33.61 | 62.5 |
| OQU92539 | Sorghum | extracellular | 31.93 | 62.3 |
| Bra041021.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 27.73 | 61.11 |
| CDY05209 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.73 | 61.11 |
| AT3G05890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 27.73 | 61.11 |
| TraesCS4D01G197800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.89 | 59.26 |
| Bra001171.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 26.89 | 58.18 |
| CDX74126 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.89 | 58.18 |
| TraesCS1D01G062900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.05 | 57.41 |
| CDY49985 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.05 | 56.36 |
| PGSC0003DMT400046962 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 26.05 | 55.36 |
| Zm00001d047419_P001 | Maize | extracellular, golgi, vacuole | 27.73 | 55.0 |
| Solyc01g102290.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 25.21 | 53.57 |
| TraesCS5D01G369400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.57 | 46.58 |
| TraesCS7D01G491100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.37 | 37.66 |
| TraesCS7D01G491000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 23.53 | 37.33 |
| TraesCS7D01G491500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 23.53 | 36.84 |
| TraesCS7D01G150900.1 | Wheat | extracellular, golgi, vacuole | 20.17 | 31.58 |
| PGSC0003DMT400046963 | Potato | endoplasmic reticulum, plasma membrane | 18.49 | 30.56 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G597300.1 | EnsemblPlantsGene:TraesCS2D01G597300 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PMP3 |
| PANTHER:PTHR21659 | PANTHER:PTHR21659:SF41 | PFAM:PF01679 | ScanProsite:PS01309 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:649781111..649781640
Molecular Weight (calculated)
12707.8 Da
IEP (calculated)
3.925
GRAVY (calculated)
0.502
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESTAIAPP PQPMAPPQPV EENATAAPPQ PMAPPQPMAE NATAAPPQPM AENATVVVVV PPPPPDGTTT FLCLILAFFI PPLGVFLKYK CEIEFWICLI
101: LTFLAYAPGI IYAVWVIVK
101: LTFLAYAPGI IYAVWVIVK
1: MGSETFLEII LAILLPPVGV FLRYGCGVEF WICLLLTILG YIPGIIYAIY VLVG
Arabidopsis Description
At2g38901/At2g38901 [Source:UniProtKB/TrEMBL;Acc:Q941D7]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.