Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 6
  • vacuole 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39689 Canola endoplasmic reticulum, extracellular, plasma membrane 100.0 100.0
AT2G24040.1 Thale cress plasma membrane 93.33 93.33
Bra024053.1-P Field mustard endoplasmic reticulum, plasma membrane 77.33 77.33
Bra011209.1-P Field mustard extracellular 72.0 72.0
Bra026283.1-P Field mustard endoplasmic reticulum, extracellular 70.67 68.83
VIT_11s0037g00420.t01 Wine grape extracellular 64.0 66.67
Solyc07g005730.2.1 Tomato endoplasmic reticulum, extracellular 62.67 66.2
Bra000104.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 46.67 64.81
Bra017095.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 46.67 64.81
Bra001171.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 46.67 63.64
PGSC0003DMT400028949 Potato endoplasmic reticulum, extracellular 60.0 63.38
Bra011208.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 61.33 62.16
Bra041021.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 44.0 61.11
Solyc07g005720.2.1 Tomato endoplasmic reticulum, plasma membrane 56.0 59.15
GSMUA_Achr7P19400_001 Banana extracellular, golgi, vacuole 52.0 58.21
Os06t0184800-01 Rice plasma membrane 56.0 55.26
TraesCS7D01G150900.1 Wheat extracellular, golgi, vacuole 54.67 53.95
TraesCS7A01G149300.1 Wheat extracellular, golgi, plasma membrane 54.67 53.95
GSMUA_Achr7P16140_001 Banana endoplasmic reticulum, extracellular, golgi 45.33 49.28
Zm00001d045096_P001 Maize endoplasmic reticulum, extracellular, golgi 48.0 48.0
EER89340 Sorghum extracellular, golgi 48.0 47.37
KRH72320 Soybean plasma membrane 45.33 30.63
TraesCS7B01G053000.1 Wheat cytosol, nucleus, plasma membrane 54.67 21.47
Protein Annotations
EnsemblPlants:Bra032129.1EnsemblPlants:Bra032129.1-PEnsemblPlantsGene:Bra032129GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:PMP3PANTHER:PTHR21659PANTHER:PTHR21659:SF34PFAM:PF01679ScanProsite:PS01309TMHMM:TMhelix
UniParc:UPI00025447CDUniProt:M4ETJ7MapMan:35.1:::
Description
AT2G24040 (E=5e-039) | hydrophobic protein, putative / low temperature and salt responsive protein, putative
Coordinates
chrA04:+:10722343..10722785
Molecular Weight (calculated)
8578.8 Da
IEP (calculated)
4.478
GRAVY (calculated)
1.052
Length
75 amino acids
Sequence
(BLAST)
1: MVSSCELCCE IVIAILLPPV GVCLRHGCCT VEFFICLVLT CLGYLPGIIY AIYAILFLNR DEYFDEYRRP IYYVA
Best Arabidopsis Sequence Match ( AT2G24040.1 )
(BLAST)
1: MASSCELCCE IFIAILLPPV GVCLRHGCCT VEFFICLILT CLGYLPGIIY AIYAICFLHR DEYFDEYRRP IYYVA
Arabidopsis Description
Putative low temperature and salt responsive protein [Source:UniProtKB/TrEMBL;Acc:B6DVK0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.