Factsheet for GSMUA_Achr7P15490_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g049960.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	92.59	92.59
KRH57776	Soybean	endoplasmic reticulum, plasma membrane, vacuole	92.59	92.59
Bra000104.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	90.74	90.74
CDY07689	Canola	endoplasmic reticulum, extracellular, plasma membrane	90.74	90.74
CDY14420	Canola	endoplasmic reticulum, extracellular, plasma membrane	90.74	90.74
AT2G38905.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	90.74	90.74
VIT_13s0019g03650.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	90.74	90.74
Bra017095.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
CDX93294	Canola	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
CDY18362	Canola	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
EES18938	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
KRH04745	Soybean	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
Zm00001d035505_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	87.04	87.04
TraesCS4D01G197700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	87.04	87.04
TraesCS4B01G197300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	87.04	87.04
TraesCS4A01G107100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	87.04	87.04
TraesCS4D01G197800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
HORVU4Hr1G057020.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
TraesCS4A01G107000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
TraesCS1D01G062900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
Os05t0122700-01	Rice	endoplasmic reticulum, plasma membrane	83.33	83.33
TraesCS1B01G080300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
TraesCS1A01G062000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
GSMUA_Achr8P22180_001	Banana	endoplasmic reticulum, plasma membrane	64.81	64.81
GSMUA_Achr9P16790_001	Banana	endoplasmic reticulum, plasma membrane	62.96	62.96
GSMUA_Achr2P18430_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	64.81	61.4
GSMUA_Achr1P19010_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	61.11	57.89
GSMUA_Achr11P...	Banana	golgi, plasma membrane, vacuole	59.26	56.14
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane, vacuole	57.41	54.39
HORVU4Hr1G057000.1	Barley	plasma membrane	87.04	52.81
GSMUA_Achr4P04270_001	Banana	plasma membrane	66.67	49.32
GSMUA_Achr4P12770_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	64.81	47.95
GSMUA_Achr7P16140_001	Banana	endoplasmic reticulum, extracellular, golgi	61.11	47.83
GSMUA_Achr7P19400_001	Banana	extracellular, golgi, vacuole	59.26	47.76

Protein Annotations

EnsemblPlants:GSMUA_Achr7P15490_001	EnsemblPlants:GSMUA_Achr7T15490_001	EnsemblPlantsGene:GSMUA_Achr7G15490_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PMP3	PANTHER:PTHR21659	PANTHER:PTHR21659:SF53	PFAM:PF01679	ScanProsite:PS01309	TMHMM:TMhelix
UniParc:UPI000295E2C3	UniProt:M0THT6	MapMan:35.2	:	:	:

Description

Low temperature-induced protein lt101.2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G15490_001]

Coordinates

chr7:-:12386610..12386847

Molecular Weight (calculated)

5897.6 Da

IEP (calculated)

3.928

GRAVY (calculated)

1.626

Length

54 amino acids

Sequence
(BLAST)

1: MGSATFLEVI LAILLPPVGV FLRYGIGVEF WIDLLLTILG YIPGIIYALY VLVG

Best Arabidopsis Sequence Match ( AT2G38905.1 )
(BLAST)

1: MGSETFLEII LAILLPPVGV FLRYGCGVEF WICLLLTILG YIPGIIYAIY VLVG

Arabidopsis Description

At2g38901/At2g38901 [Source:UniProtKB/TrEMBL;Acc:Q941D7]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.