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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 4
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana golgi, plasma membrane, vacuole 89.47 89.47
GSMUA_Achr1P19010_001 Banana endoplasmic reticulum, plasma membrane, vacuole 85.96 85.96
GSMUA_Achr2P18430_001 Banana endoplasmic reticulum, plasma membrane, vacuole 84.21 84.21
GSMUA_Achr9P16790_001 Banana endoplasmic reticulum, plasma membrane 78.95 83.33
KRG90444 Soybean endoplasmic reticulum, plasma membrane, vacuole 82.46 82.46
GSMUA_Achr8P22180_001 Banana endoplasmic reticulum, plasma membrane 77.19 81.48
HORVU2Hr1G027430.2 Barley endoplasmic reticulum, plasma membrane, vacuole 80.7 80.7
TraesCS2D01G157100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 80.7 80.7
TraesCS2B01G177100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 80.7 80.7
TraesCS2A01G152000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 80.7 80.7
KRH33736 Soybean endoplasmic reticulum, plasma membrane 80.7 80.7
Os07t0635900-01 Rice endoplasmic reticulum, plasma membrane 77.19 78.57
Zm00001d022264_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 77.19 78.57
KXG36781 Sorghum golgi, plasma membrane, vacuole 78.95 77.59
VIT_14s0060g00280.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 77.19 69.84
GSMUA_Achr7P15490_001 Banana endoplasmic reticulum, plasma membrane, vacuole 54.39 57.41
GSMUA_Achr7P19400_001 Banana extracellular, golgi, vacuole 54.39 46.27
GSMUA_Achr4P04270_001 Banana plasma membrane 57.89 45.21
GSMUA_Achr4P12770_001 Banana endoplasmic reticulum, plasma membrane, vacuole 54.39 42.47
GSMUA_Achr7P16140_001 Banana endoplasmic reticulum, extracellular, golgi 50.88 42.03
Protein Annotations
EnsemblPlants:GSMUA_Achr11P00650_001EnsemblPlants:GSMUA_Achr11T00650_001EnsemblPlantsGene:GSMUA_Achr11G00650_001GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:PMP3PANTHER:PTHR21659PANTHER:PTHR21659:SF59PFAM:PF01679ScanProsite:PS01309TMHMM:TMhelix
UniParc:UPI000296E858UniProt:M0RN96MapMan:35.2:::
Description
Hydrophobic protein LTI6B [Source:GMGC_GENE;Acc:GSMUA_Achr11G00650_001]
Coordinates
chr11:+:407415..408123
Molecular Weight (calculated)
6294.0 Da
IEP (calculated)
4.105
GRAVY (calculated)
1.330
Length
57 amino acids
Sequence
(BLAST)
1: MADEGTVNCI DILVAILLPP LGVFLKFGCQ VEFWICLLLT LFGYLPGIIY AVYAITK
Best Arabidopsis Sequence Match ( AT3G05880.1 )
(BLAST)
1: MSTATFVDII IAILLPPLGV FLRFGCGVEF WICLVLTLLG YIPGIIYAIY VLTK
Arabidopsis Description
RCI2ARCI2A [Source:UniProtKB/TrEMBL;Acc:A0A178V7D5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.