CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035505_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	98.15	98.15
TraesCS1D01G062900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	92.59	92.59
TraesCS1B01G080300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	92.59	92.59
TraesCS1A01G062000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	92.59	92.59
Os05t0122700-01	Rice	endoplasmic reticulum, plasma membrane	92.59	92.59
AT2G38905.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	92.59	92.59
GSMUA_Achr7P15490_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
VIT_13s0019g03650.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	88.89	88.89
Solyc04g049960.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
Bra000104.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
Bra017095.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
CDX93294	Canola	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
CDY07689	Canola	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
CDY14420	Canola	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
CDY18362	Canola	endoplasmic reticulum, extracellular, plasma membrane	88.89	88.89
KRH57776	Soybean	endoplasmic reticulum, plasma membrane, vacuole	87.04	87.04
EER92424	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	85.19	85.19
KRH04745	Soybean	endoplasmic reticulum, plasma membrane, vacuole	83.33	83.33
EES18986	Sorghum	endoplasmic reticulum, extracellular	61.11	62.26
EES18987	Sorghum	endoplasmic reticulum, extracellular	62.96	59.65
EER97173	Sorghum	endoplasmic reticulum, extracellular	77.78	58.33
KXG36781	Sorghum	golgi, plasma membrane, vacuole	61.11	56.9
KXG32309	Sorghum	golgi, plasma membrane, vacuole	59.26	56.14
OQU92539	Sorghum	extracellular	53.7	47.54
EER89340	Sorghum	extracellular, golgi	57.41	40.79
EER88740	Sorghum	endoplasmic reticulum, extracellular, vacuole	55.56	39.47

Protein Annotations

EnsemblPlants:EES18938	EnsemblPlantsGene:SORBI_3009G025500	EntrezGene:8071248	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PMP3	PANTHER:PTHR21659	PANTHER:PTHR21659:SF53	PFAM:PF01679	ProteinID:EES18938	ProteinID:EES18938.1
RefSeq:XP_002440508.1	ScanProsite:PS01309	TMHMM:TMhelix	unigene:Sbi.13064	UniParc:UPI0001A88AF7	UniProt:C5YZ30
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:2266364..2267165

Molecular Weight (calculated)

5957.7 Da

IEP (calculated)

3.980

GRAVY (calculated)

1.680

Length

54 amino acids

Sequence
(BLAST)

1: MGSETFLEIL LAILLPPVGV FLRYGIGVEF WICLLLTILG YIPGIIYAVY VLVA

Best Arabidopsis Sequence Match ( AT2G38905.1 )
(BLAST)

1: MGSETFLEII LAILLPPVGV FLRYGCGVEF WICLLLTILG YIPGIIYAIY VLVG

Arabidopsis Description

At2g38901/At2g38901 [Source:UniProtKB/TrEMBL;Acc:Q941D7]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.