Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028718_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 98.15 | 98.15 |
| Os03t0286900-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 92.59 | 92.59 |
| VIT_08s0040g02660.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 90.74 | 89.09 |
| EES18938 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 85.19 | 85.19 |
| AT1G57550.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 66.67 | 69.23 |
| CDY71166 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 61.11 | 63.46 |
| CDY23796 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 59.26 | 61.54 |
| EES18986 | Sorghum | endoplasmic reticulum, extracellular | 59.26 | 60.38 |
| CDY71498 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 57.41 | 59.62 |
| CDY31781 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 57.41 | 59.62 |
| CDY48407 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 55.56 | 57.69 |
| EES18987 | Sorghum | endoplasmic reticulum, extracellular | 59.26 | 56.14 |
| EER97173 | Sorghum | endoplasmic reticulum, extracellular | 74.07 | 55.56 |
| KXG32309 | Sorghum | golgi, plasma membrane, vacuole | 57.41 | 54.39 |
| KXG36781 | Sorghum | golgi, plasma membrane, vacuole | 57.41 | 53.45 |
| OQU92539 | Sorghum | extracellular | 50.0 | 44.26 |
| EER88740 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 61.11 | 43.42 |
| EER89340 | Sorghum | extracellular, golgi | 53.7 | 38.16 |
Protein Annotations
| EnsemblPlants:EER92424 | EnsemblPlantsGene:SORBI_3001G409400 | EntrezGene:8084551 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PMP3 | PANTHER:PTHR21659 | PANTHER:PTHR21659:SF53 | PFAM:PF01679 | ProteinID:EER92424 | ProteinID:EER92424.1 |
| RefSeq:XP_002465426.1 | ScanProsite:PS01309 | TMHMM:TMhelix | unigene:Sbi.618 | UniParc:UPI0001A82C0E | UniProt:C5WNL0 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:69299042..69300412
Molecular Weight (calculated)
5935.6 Da
IEP (calculated)
3.928
GRAVY (calculated)
1.633
Length
54 amino acids
Sequence
(BLAST)
(BLAST)
1: MASATFLEVL LAIFLPPVGV FLRYGCGVEF WIDLLLTVLG YIPGIIYALY VLVA
1: MGSETFLEII LAILLPPVGV FLRYGCGVEF WICLLLTILG YIPGIIYAIY VLVG
Arabidopsis Description
At2g38901/At2g38901 [Source:UniProtKB/TrEMBL;Acc:Q941D7]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.