CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	93.12	96.44
GSMUA_Achr10P...	Banana	cytosol	61.64	77.93
VIT_04s0008g03220.t01	Wine grape	cytosol	76.72	72.68
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	74.07	71.79
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	74.07	71.79
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	73.02	70.77
AT5G11650.1	Thale cress	plastid	73.02	70.77
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	74.87	70.05
PGSC0003DMT400011430	Potato	cytosol	74.34	69.55
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	31.48	68.39
GSMUA_Achr8P20130_001	Banana	plastid	67.46	68.36
GSMUA_Achr7P13720_001	Banana	plastid	69.58	66.08
Os01t0199400-01	Rice	cytosol, endoplasmic reticulum, peroxisome	66.93	64.05
TraesCS3B01G160100.1	Wheat	cytosol	65.34	63.5
TraesCS3D01G142300.1	Wheat	cytosol	65.08	63.24
TraesCS3A01G312100.1	Wheat	cytosol	64.81	62.98
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	65.34	61.14
Zm00001d039416_P001	Maize	cytosol	64.55	61.0
HORVU3Hr1G027160.1	Barley	golgi, mitochondrion	64.81	60.05
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	26.45	57.14
GSMUA_AchrUn_...	Banana	mitochondrion	64.81	56.71
KRH60583	Soybean	peroxisome	41.8	55.63
KRH41883	Soybean	endoplasmic reticulum, golgi	50.79	53.33
KRH48707	Soybean	endoplasmic reticulum, golgi	47.35	47.35
KRH69290	Soybean	cytosol	23.02	27.97
KRH48488	Soybean	cytosol	16.14	27.35
KRH20516	Soybean	cytosol	23.28	27.16
KRH68197	Soybean	cytosol	24.87	27.01
KRH19112	Soybean	cytosol	23.28	26.99
KRH18244	Soybean	cytosol	24.34	26.67
KRG93887	Soybean	cytosol	14.02	26.63
KRH02768	Soybean	cytosol	20.11	26.48
KRH39183	Soybean	cytosol	24.6	26.27
KRH35942	Soybean	plastid	26.45	26.11
KRG92965	Soybean	cytosol	22.49	25.99
KRG90831	Soybean	plastid	26.98	25.76
KRH75362	Soybean	nucleus	26.72	25.63
KRH36216	Soybean	nucleus	23.28	25.36
KRH34878	Soybean	cytosol	21.69	25.23

Protein Annotations

EntrezGene:100816265	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	EMBL:ACUP02002219	EnsemblPlantsGene:GLYMA_04G085500
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016298	GO:GO:0016787	InterPro:Hydrolase_4	UniProt:I1JUW8
InterPro:IPR029058	EnsemblPlants:KRH62086	ProteinID:KRH62086	ProteinID:KRH62086.1	PFAM:PF12146	PANTHER:PTHR11614
PANTHER:PTHR11614:SF143	MEROPS:S33.A11	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI0002339651	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:7292339..7296014

Molecular Weight (calculated)

42354.4 Da

IEP (calculated)

9.696

GRAVY (calculated)

-0.015

Length

378 amino acids

Sequence
(BLAST)

001: MSSVETEMEP LTSGASNRII PLLKALRASL IFVYTFFLSF LLFVLPRRRR LSPAAGTPSP KKHLRRRWLV REEEDTCRRR ALAQDVGMGR DEGWYRWSTS
101: IFYGVRNNAL FCRSWFPVAG DVKGILIIIH GLNEHSGRYA DFARQLTSCN FGVYAMDWIG HGGSDGLHGY VPSLDHVVVD TGAFLEKIRS ENPGIPCFLF
201: GHSTGGAVVL KAASHPHIEV MVEGIILTSP ALRVKPAHPI VGAVAPIFSL VAPRFQFKGA NKRGIPVSRD PAALLAKYSD PLVYTGPIRV RTGHEILRIS
301: SYLMRNFNSV TVPFFVLHGT ADKVTDPLAS QDLYDKAASK FKDIKLYDGF LHDLLFEPER EEIAQDIINW MEKRLFTI

Best Arabidopsis Sequence Match ( AT5G11650.1 )
(BLAST)

001: MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE
101: ISCSLFYGRR GNALFSRSWL PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTEAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI
301: LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF EPEREEVGRD IIDWMMNRLD DVNGSAASLW

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.