Factsheet for VIT_04s0008g03220.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	58.4	77.93
KRH62086	Soybean	plastid	72.68	76.72
PGSC0003DMT400011430	Potato	cytosol	77.44	76.49
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	76.44	75.5
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	68.42	74.79
GSMUA_Achr8P20130_001	Banana	plastid	66.42	71.05
AT5G11650.1	Thale cress	plastid	68.67	70.26
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	30.58	70.11
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	68.17	69.74
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	67.92	69.49
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	67.92	69.49
GSMUA_Achr7P13720_001	Banana	plastid	68.42	68.59
Os01t0199400-01	Rice	cytosol, endoplasmic reticulum, peroxisome	65.41	66.08
TraesCS3A01G312100.1	Wheat	cytosol	64.16	65.81
TraesCS3D01G142300.1	Wheat	cytosol	64.16	65.81
TraesCS3B01G160100.1	Wheat	cytosol	64.16	65.81
Zm00001d039416_P001	Maize	cytosol	63.91	63.75
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	63.91	63.12
HORVU3Hr1G027160.1	Barley	golgi, mitochondrion	63.41	62.01
GSMUA_AchrUn_...	Banana	mitochondrion	62.16	57.41
VIT_17s0000g01010.t01	Wine grape	plastid	48.87	48.75
VIT_17s0000g01070.t01	Wine grape	plastid	48.37	48.37
VIT_10s0116g00730.t01	Wine grape	cytosol	24.31	30.89
VIT_00s0317g00110.t01	Wine grape	cytosol	23.81	29.78
VIT_07s0005g00510.t01	Wine grape	cytosol	23.06	26.36
VIT_09s0002g05730.t01	Wine grape	cytosol	21.05	26.17
VIT_14s0006g02900.t01	Wine grape	plastid	23.81	24.68
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	25.56	24.46
VIT_13s0019g04260.t01	Wine grape	cytosol	19.8	24.01
VIT_10s0003g04950.t01	Wine grape	cytosol	17.04	20.73

Protein Annotations

EntrezGene:100254240	wikigene:100254240	Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A5BHR1	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	EMBL:AM459901	ProteinID:CAN83251	ProteinID:CAN83251.1	ProteinID:CCB46691	ProteinID:CCB46691.1
EMBL:FN595231	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016298	GO:GO:0016787	InterPro:Hydrolase_4	InterPro:IPR029058	EntrezGene:LOC100254240
wikigene:LOC100254240	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF143	MEROPS:S33.A11
SUPFAM:SSF53474	TIGR:TC56357	UniParc:UPI0001524597	ArrayExpress:VIT_04s0008g03220	EnsemblPlantsGene:VIT_04s0008g03220	EnsemblPlants:VIT_04s0008g03220.t01
unigene:Vvi.3754	RefSeq:XP_002283676	RefSeq:XP_002283676.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:-:2657661..2663242

Molecular Weight (calculated)

44582.9 Da

IEP (calculated)

8.557

GRAVY (calculated)

-0.075

Length

399 amino acids

Sequence
(BLAST)

001: MESVQMEELT SGASGRIIPV FRNLRRSVLS WQSIRRSLIF IHSIFLWLIL LLPRHRLSSS AQSPPAPVKS CRRRSVFRRD EEDTLKRRAL AEGLEMVTES
101: EDGTSLCRCA TSLFYGTRRN ALFCRSWFPV AGEMKGIMII IHGLNEHSGR YADFAKQLTS CSFGVYAMDW IGHGGSDGLH GYVPSLDHVV ADTGAFLEKI
201: KSENPGIPCF LFGHSTGGAV VLKAASYPEI EGILEGIVLT SPALRVKPAH PIVGAVAPIF SLVVPRYQFK GANKRGIPVS RDPAAMLAKY SDPLVYTGPI
301: RVRTGHEILR ISSYLTRNFK SVTVPFLVLH GTADRVTDPL ASQDLYTEAA SRCKNIKLYD GFLHDLLFEP EREEIAQDII DWMEKRLCGH DFENVHSHW

Best Arabidopsis Sequence Match ( AT5G11650.1 )
(BLAST)

001: MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE
101: ISCSLFYGRR GNALFSRSWL PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTEAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI
301: LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF EPEREEVGRD IIDWMMNRLD DVNGSAASLW

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.