Factsheet for PGSC0003DMT400011430

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	98.02	98.02
VIT_04s0008g03220.t01	Wine grape	cytosol	76.49	77.44
GSMUA_Achr10P...	Banana	cytosol	56.68	76.59
KRH62086	Soybean	plastid	69.55	74.34
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	67.08	74.25
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	66.09	68.46
GSMUA_Achr8P20130_001	Banana	plastid	63.12	68.36
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	65.84	68.21
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	65.84	68.21
AT5G11650.1	Thale cress	plastid	65.1	67.44
GSMUA_Achr7P13720_001	Banana	plastid	65.84	66.83
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	28.47	66.09
Os01t0199400-01	Rice	cytosol, endoplasmic reticulum, peroxisome	62.62	64.05
TraesCS3B01G160100.1	Wheat	cytosol	61.39	63.75
TraesCS3D01G142300.1	Wheat	cytosol	61.14	63.5
TraesCS3A01G312100.1	Wheat	cytosol	60.64	62.98
Zm00001d039416_P001	Maize	cytosol	60.89	61.5
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	61.14	61.14
HORVU3Hr1G027160.1	Barley	golgi, mitochondrion	60.89	60.29
GSMUA_AchrUn_...	Banana	mitochondrion	59.65	55.79
PGSC0003DMT400083974	Potato	plastid	48.76	48.28
PGSC0003DMT400062139	Potato	cytosol	17.82	31.72
PGSC0003DMT400012910	Potato	cytosol	24.75	31.55
PGSC0003DMT400077598	Potato	cytosol	22.52	28.53
PGSC0003DMT400026999	Potato	cytosol	23.02	27.19
PGSC0003DMT400081375	Potato	cytosol	23.51	26.99
PGSC0003DMT400014303	Potato	cytosol	21.29	26.3
PGSC0003DMT400067900	Potato	cytosol	21.29	25.07
PGSC0003DMT400060321	Potato	cytosol	19.31	23.28
PGSC0003DMT400037702	Potato	cytosol	22.77	23.17
PGSC0003DMT400054412	Potato	cytosol	17.82	22.57

Protein Annotations

EntrezGene:102590849	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	InterPro:Hydrolase_4
InterPro:IPR029058	UniProt:M0ZZJ9	PFAM:PF12146	EnsemblPlantsGene:PGSC0003DMG400004483	PGSC:PGSC0003DMG400004483	EnsemblPlants:PGSC0003DMT400011430
PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF143	MEROPS:S33.A11	SUPFAM:SSF53474	UniParc:UPI000294877A
RefSeq:XP_006364726.1	SEG:seg	:	:	:	:

Description

Lysophospholipase [Source:PGSC_GENE;Acc:PGSC0003DMG400004483]

Coordinates

chr8:-:38286421..38290590

Molecular Weight (calculated)

45406.6 Da

IEP (calculated)

8.858

GRAVY (calculated)

-0.100

Length

404 amino acids

Sequence
(BLAST)

001: MESSLPVEEL TSGASGRIIP LFKNLRRSVF SYQTYRRLII FIQSIFLWVI LLSRWRFSTS PSSPPPSPSA ATTTVLGKRR KFALRRDEED TQRRRALAEA
101: LDMVVENDGV SCRWNTSLFF GARRNALFCR SWFPVTDELR GIIIIIHGLN EHSGRYAHFA RQLNSCNFGV YAMDWIGHGG SDGLHGYVPS LDHVVADTGA
201: FLEKVKFENP GIPCFLFGHS TGGAVVLKAA SYPHIENMLE GIILTSPALR VKPANPIVSA VAPIFSLVAP RYQFKGSHKR GIPVSRDPAA LVAKYSDPLV
301: YTGPLRVRTG HEILRISYYL MRNFKSVTVP FLVLHGSADR VTDPLASQDL YNEAASEFKD IKLYDGFLHD LLFEPEREEI AQDIIDWMHK KLDSGNLENV
401: YSQC

Best Arabidopsis Sequence Match ( AT5G11650.1 )
(BLAST)

001: MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE
101: ISCSLFYGRR GNALFSRSWL PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTEAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI
301: LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF EPEREEVGRD IIDWMMNRLD DVNGSAASLW

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.