Factsheet for Solyc08g066440.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, endoplasmic reticulum, plastid

Predictor Summary:

plastid 2
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plastid
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011430	Potato	cytosol	98.02	98.02
GSMUA_Achr10P...	Banana	cytosol	56.68	76.59
VIT_04s0008g03220.t01	Wine grape	cytosol	75.5	76.44
KRH62086	Soybean	plastid	70.05	74.87
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	67.57	74.79
GSMUA_Achr8P20130_001	Banana	plastid	63.37	68.63
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	65.84	68.21
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	65.59	67.95
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	65.59	67.95
AT5G11650.1	Thale cress	plastid	64.85	67.18
GSMUA_Achr7P13720_001	Banana	plastid	65.84	66.83
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	28.71	66.67
Os01t0199400-01	Rice	cytosol, endoplasmic reticulum, peroxisome	62.38	63.8
TraesCS3B01G160100.1	Wheat	cytosol	61.14	63.5
TraesCS3D01G142300.1	Wheat	cytosol	60.89	63.24
TraesCS3A01G312100.1	Wheat	cytosol	60.64	62.98
Zm00001d039416_P001	Maize	cytosol	60.89	61.5
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	61.14	61.14
HORVU3Hr1G027160.1	Barley	golgi, mitochondrion	60.89	60.29
GSMUA_AchrUn_...	Banana	mitochondrion	59.65	55.79
Solyc03g098020.2.1	Tomato	plastid	49.26	48.77
Solyc03g006560.2.1	Tomato	cytosol	20.79	28.57
Solyc02g063160.2.1	Tomato	cytosol	24.01	28.36
Solyc04g010250.2.1	Tomato	cytosol	22.03	27.9
Solyc09g075140.2.1	Tomato	cytosol	23.76	27.27
Solyc03g119980.2.1	Tomato	cytosol	20.79	25.69
Solyc02g086040.1.1	Tomato	cytosol	16.83	24.11
Solyc05g009390.2.1	Tomato	plastid	23.51	23.93
Solyc05g056000.2.1	Tomato	cytosol	19.55	23.58
Solyc02g063200.1.1	Tomato	cytosol	19.31	22.48
Solyc02g069930.1.1	Tomato	cytosol	17.57	22.26

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787
InterPro:Hydrolase_4	InterPro:IPR029058	UniProt:K4CLM1	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614
PANTHER:PTHR11614:SF143	MEROPS:S33.A11	SUPFAM:SSF53474	EnsemblPlantsGene:Solyc08g066440.2	EnsemblPlants:Solyc08g066440.2.1	UniParc:UPI000276BCA9
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:55068480..55072635

Molecular Weight (calculated)

45167.3 Da

IEP (calculated)

9.062

GRAVY (calculated)

-0.096

Length

404 amino acids

Sequence
(BLAST)

001: MESSLPVEEL TSGASGRIIP LFKNLHRSVF SYQTYRRLII FIQSIFLWVI LLSRRRFSTS PSSPPPSPSA ATTAVLGKRR KFALRRDEED TQRRRALAEA
101: LDMTVENDGV SCRWNTSLFF GARRNALFCR SWFPVTDELR GIIIIIHGLN EHSGRYAHFA RQLNSCNFGV YAMDWIGHGG SDGLHGYVPS LDHVVADTGA
201: FLEKVKFDNP GIPCFLFGHS TGGAVVLKAA SYPHIENMVE GIILTSPALR VKPANPIVSA VAPIFSLVAP RYQFKGSHKR GIPVSRDPAA LVAKYSDPLV
301: YTGPLRVRTG HEILRISSYL MRNFKSVTVP FLVLHGSADR VTDPLASQDL YNEAASEFKD IKLYDGFLHD LLFEPEREEI AQDIIDWMHK KLDSGNLANV
401: YSQC

Best Arabidopsis Sequence Match ( AT5G11650.1 )
(BLAST)

001: MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE
101: ISCSLFYGRR GNALFSRSWL PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTEAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI
301: LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF EPEREEVGRD IIDWMMNRLD DVNGSAASLW

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.