CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol

Predictor Summary:

plastid 4
endoplasmic reticulum 1
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	99.49	99.49
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	97.18	97.18
AT5G11650.1	Thale cress	plastid	92.05	92.05
GSMUA_Achr10P...	Banana	cytosol	59.74	77.93
KRH62086	Soybean	plastid	71.79	74.07
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	68.97	73.7
VIT_04s0008g03220.t01	Wine grape	cytosol	69.49	67.92
GSMUA_Achr8P20130_001	Banana	plastid	64.1	67.02
PGSC0003DMT400011430	Potato	cytosol	68.21	65.84
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	67.95	65.59
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	28.97	64.94
GSMUA_Achr7P13720_001	Banana	plastid	64.87	63.57
TraesCS3A01G312100.1	Wheat	cytosol	61.54	61.7
TraesCS3B01G160100.1	Wheat	cytosol	61.28	61.44
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	63.59	61.39
Os01t0199400-01	Rice	cytosol, endoplasmic reticulum, peroxisome	62.05	61.27
TraesCS3D01G142300.1	Wheat	cytosol	61.03	61.18
Zm00001d039416_P001	Maize	cytosol	62.56	61.0
HORVU3Hr1G027160.1	Barley	golgi, mitochondrion	60.77	58.09
GSMUA_AchrUn_...	Banana	mitochondrion	61.79	55.79
CDX96478	Canola	plastid	43.85	47.24
CDX72991	Canola	plastid	48.97	46.93
CDX83852	Canola	plastid	45.38	46.7
CDX96722	Canola	plastid	45.38	45.62
CDY11104	Canola	plastid	50.77	42.86
CDX68225	Canola	mitochondrion	50.51	42.37
CDY72172	Canola	cytosol	13.59	33.76
CDY20587	Canola	cytosol	26.92	32.71
CDY24963	Canola	cytosol	26.41	32.39
CDY20979	Canola	cytosol	26.67	32.3
CDX93264	Canola	cytosol	26.15	32.08
CDY07008	Canola	cytosol	25.9	31.76
CDY07007	Canola	cytosol	17.95	30.84
CDX73397	Canola	cytosol	23.33	29.93
CDY40205	Canola	cytosol	23.33	29.93
CDY07006	Canola	cytosol	23.85	29.9
CDY62163	Canola	plastid	16.15	28.9
CDY07651	Canola	cytosol	26.15	28.25
CDX76667	Canola	cytosol	23.85	27.51
CDY62199	Canola	cytosol	22.82	27.13
CDY72184	Canola	cytosol	22.82	27.13
CDX79202	Canola	cytosol	12.05	26.26
CDX69469	Canola	mitochondrion	24.1	26.04
CDX83323	Canola	cytosol	22.82	25.65
CDX95729	Canola	cytosol	22.82	25.65
CDX76116	Canola	cytosol	22.56	25.43
CDY27476	Canola	cytosol	22.56	25.36
CDY55538	Canola	cytosol	22.56	25.29
CDY40888	Canola	plastid	24.62	25.13
CDY40890	Canola	plastid	24.62	25.07
CDY38348	Canola	plastid	24.62	25.07
CDX93957	Canola	cytosol	19.23	24.92
CDY69863	Canola	cytosol	21.03	24.48
CDY26499	Canola	mitochondrion	23.33	24.33
CDY44908	Canola	cytosol	20.77	24.18
CDX85571	Canola	plastid	20.0	23.78
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	22.31	23.64
CDX92543	Canola	cytosol	20.51	23.6
CDY13986	Canola	cytosol	20.26	23.58
CDX89152	Canola	mitochondrion	22.31	23.45
CDY11452	Canola	cytosol	20.51	21.05
CDX68059	Canola	cytosol	10.26	21.05
CDX93265	Canola	cytosol	25.38	16.42
CDY38132	Canola	mitochondrion	24.36	15.7
CDX85514	Canola	cytosol	24.62	15.58

Protein Annotations

EnsemblPlants:CDX69743	EnsemblPlantsGene:GSBRNA2T00135781001	Gene3D:3.40.50.1820	GO:A0A078C3X5	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:Hydrolase_4	InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF143	PFAM:PF12146	PRINTS:PR00111
ProteinID:CDX69743	ProteinID:CDX69743.1	SEG:seg	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI0004EDC940
MapMan:35.1	:	:	:	:	:

Description

BnaA10g20920D

Coordinates

chrLK031790:-:1615986..1617761

Molecular Weight (calculated)

43322.5 Da

IEP (calculated)

9.579

GRAVY (calculated)

-0.032

Length

390 amino acids

Sequence
(BLAST)

001: MASTSAEIEQ LTSGASNRII PILKTLRKCV IFVLSLFLSL LLLLRPRRRV LPLPSPEEEA GPAAPSRRWR RKMAWKLEEE DTARRRSLAE GVEIGEIDSR
101: WSSFLFYGRR GNALFSRSWL PLSGELRGIL IIIHGLNEHS GRYSQFAKQL NASNFGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTVAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAALSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLVAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGHEI
301: LRITAYLTRN FKSITVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YEGFLHDLLF EPEREEVGRD IIGWMMKRLD DVNGSAAGLW

Best Arabidopsis Sequence Match ( AT5G11650.1 )
(BLAST)

001: MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE
101: ISCSLFYGRR GNALFSRSWL PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTEAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI
301: LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF EPEREEVGRD IIDWMMNRLD DVNGSAASLW

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.