CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041073.1-P	Field mustard	cytosol	99.07	99.38
CDY20587	Canola	cytosol	95.65	95.95
AT1G11090.1	Thale cress	cytosol	83.54	83.02
PGSC0003DMT400012910	Potato	cytosol	65.84	66.88
VIT_10s0116g00730.t01	Wine grape	cytosol	63.98	65.61
Solyc03g006560.2.1	Tomato	cytosol	58.07	63.61
KRH20516	Soybean	cytosol	63.66	63.27
GSMUA_Achr9P24530_001	Banana	cytosol	50.31	60.67
TraesCS2A01G202200.1	Wheat	cytosol	60.25	58.61
TraesCS2B01G229300.1	Wheat	cytosol	59.94	58.31
TraesCS2D01G208700.1	Wheat	cytosol	59.32	57.88
Os07t0565700-01	Rice	cytosol	59.63	57.48
Zm00001d006611_P001	Maize	cytosol	58.7	56.59
EER99555	Sorghum	cytosol	59.01	56.21
HORVU2Hr1G039890.6	Barley	cytosol, mitochondrion	57.14	50.55
CDY24963	Canola	cytosol	43.79	44.34
CDX93264	Canola	cytosol	41.93	42.45
CDY07008	Canola	cytosol	41.61	42.14
CDY07007	Canola	cytosol	29.5	41.85
CDY07006	Canola	cytosol	39.44	40.84
CDY40205	Canola	cytosol	38.2	40.46
CDX73397	Canola	cytosol	38.2	40.46
CDX79202	Canola	cytosol	22.36	40.22
CDY72172	Canola	cytosol	19.57	40.13
CDY07651	Canola	cytosol	44.1	39.34
CDY62199	Canola	cytosol	40.06	39.33
CDY72184	Canola	cytosol	40.06	39.33
CDX76667	Canola	cytosol	40.68	38.76
CDX95729	Canola	cytosol	41.61	38.62
CDX83323	Canola	cytosol	41.61	38.62
CDY27476	Canola	cytosol	40.99	38.04
CDY55538	Canola	cytosol	40.99	37.93
CDY69863	Canola	cytosol	39.44	37.91
CDY44908	Canola	cytosol	39.13	37.61
CDX85571	Canola	plastid	38.2	37.5
CDY13986	Canola	cytosol	38.51	37.01
CDY62163	Canola	plastid	24.84	36.7
CDX93957	Canola	cytosol	34.16	36.54
CDX92543	Canola	cytosol	38.2	36.28
CDX69469	Canola	mitochondrion	39.13	34.9
CDX76116	Canola	cytosol	37.27	34.68
CDX89152	Canola	mitochondrion	39.75	34.5
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	37.27	32.61
CDY26499	Canola	mitochondrion	37.58	32.35
CDX68059	Canola	cytosol	18.63	31.58
CDY11452	Canola	cytosol	36.65	31.05
CDY38348	Canola	plastid	36.34	30.55
CDY40888	Canola	plastid	36.02	30.37
CDY40890	Canola	plastid	36.02	30.29
CDX83852	Canola	plastid	32.61	27.7
CDX96722	Canola	plastid	32.92	27.32
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	32.3	26.67
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	31.99	26.41
CDX96478	Canola	plastid	28.88	25.69
CDX72991	Canola	plastid	31.37	24.82
CDX68225	Canola	mitochondrion	32.61	22.58
CDY11104	Canola	plastid	32.3	22.51
CDX85514	Canola	cytosol	40.68	21.27
CDX93265	Canola	cytosol	39.75	21.23
CDY38132	Canola	mitochondrion	39.75	21.16

Protein Annotations

EnsemblPlants:CDY20979	EnsemblPlantsGene:GSBRNA2T00015128001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF20	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDY20979
ProteinID:CDY20979.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EE8ADA	UniProt:A0A078G6C2	MapMan:35.1

Description

BnaA08g25460DBnaA08g25460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6C2]

Coordinates

chrLK032115:+:169155..170314

Molecular Weight (calculated)

35916.2 Da

IEP (calculated)

6.404

GRAVY (calculated)

-0.136

Length

322 amino acids

Sequence
(BLAST)

001: MSDHDLSPEI NFWGDTPEQD YFTLKGITGS KSYFTSPRGL NLFTRSWLPS SSSSSPPRGI IFMVHGYGND ISWTFQSTAI FLAQNGFACF ALDIEGHGRS
101: DGVRAYVPSV DLVVHDLISF LDSIKKQPKY QTSPRFLFGE SMGGAISLLI HFLDPVAFDG AVLVAPMCKI SDKVRPKWPI DRILITISSL VPTWAIVPTE
201: DLLEKCIKVE EKKPIAKRNP MRYGGKPRLG TVMELLRVTD YLGKKLKDVS VPFLVLHGSA DVVTDPEVSR ELYESAKSED KTLKIYDGMM HSMLFGETDE
301: NIEIVRGDIV GWLNNRCGGD RT

Best Arabidopsis Sequence Match ( AT1G11090.1 )
(BLAST)

001: MSDQQLETEI NFWGETSEED YFNLKGIIGS KSFFTSPRGL NLFTRSWLPS SSSPPRGLIF MVHGYGNDVS WTFQSTPIFL AQMGFACFAL DIEGHGRSDG
101: VRAYVPSVDL VVDDIISFFN SIKQNPKFQG LPRFLFGESM GGAICLLIQF ADPLGFDGAV LVAPMCKISD KVRPKWPVDQ FLIMISRFLP TWAIVPTEDL
201: LEKSIKVEEK KPIAKRNPMR YNEKPRLGTV MELLRVTDYL GKKLKDVSIP FIIVHGSADA VTDPEVSREL YEHAKSKDKT LKIYDGMMHS MLFGEPDDNI
301: EIVRKDIVSW LNDRCGGDKT KTQV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O04083]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.